Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 FAM220BP-201ENST00000377689 816 ntBASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 HLA-H-201ENST00000383620 1096 ntBASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC112492.5-201ENST00000421897 457 ntBASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 AL589987.1-201ENST00000453380 819 ntBASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC135586.1-201ENST00000539323 574 ntBASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 AL079307.3-201ENST00000556114 283 ntBASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC044860.1-202ENST00000559481 777 ntBASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC140912.1-201ENST00000577171 1054 ntBASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 MIR4259-201ENST00000584466 101 ntBASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC008494.3-201ENST00000606615 944 ntBASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 CETN4P-206ENST00000642099 2168 ntBASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
KRTAP4-1Q9BYQ7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 SPDYE19P-201ENST00000338590 713 ntBASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 MIR1909-201ENST00000411312 80 ntBASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 AL353779.1-201ENST00000434793 351 ntBASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 ACA64.2-201ENST00000459014 129 ntBASIC8.66□□□□□ -1.02
KRTAP4-1Q9BYQ7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms