Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHOX2BQ99453 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHOX2BQ99453 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHOX2BQ99453 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHOX2BQ99453 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHOX2BQ99453 AKAP8P1-201ENST00000434743 1349 ntBASIC17.12■□□□□ 0.33
PHOX2BQ99453 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHOX2BQ99453 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHOX2BQ99453 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHOX2BQ99453 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHOX2BQ99453 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHOX2BQ99453 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.12■□□□□ 0.33
PHOX2BQ99453 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 AC099398.1-201ENST00000567919 2776 ntBASIC17.11■□□□□ 0.33
PHOX2BQ99453 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.11■□□□□ 0.33
PHOX2BQ99453 AP006294.1-201ENST00000415407 339 ntBASIC17.11■□□□□ 0.33
PHOX2BQ99453 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.11■□□□□ 0.33
PHOX2BQ99453 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 ALG1L8P-201ENST00000533887 760 ntBASIC17.11■□□□□ 0.33
PHOX2BQ99453 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 AL109936.8-201ENST00000641772 604 ntBASIC17.11■□□□□ 0.33
PHOX2BQ99453 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHOX2BQ99453 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PHOX2BQ99453 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHOX2BQ99453 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
PHOX2BQ99453 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHOX2BQ99453 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.1■□□□□ 0.33
PHOX2BQ99453 AC132938.6-201ENST00000623828 1655 ntBASIC17.1■□□□□ 0.33
PHOX2BQ99453 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHOX2BQ99453 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHOX2BQ99453 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHOX2BQ99453 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHOX2BQ99453 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHOX2BQ99453 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHOX2BQ99453 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PHOX2BQ99453 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PHOX2BQ99453 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
PHOX2BQ99453 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHOX2BQ99453 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHOX2BQ99453 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHOX2BQ99453 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.1■□□□□ 0.33
PHOX2BQ99453 AL353779.1-201ENST00000434793 351 ntBASIC17.1■□□□□ 0.33
PHOX2BQ99453 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.1■□□□□ 0.33
PHOX2BQ99453 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PHOX2BQ99453 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.1■□□□□ 0.33
PHOX2BQ99453 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.1■□□□□ 0.33
PHOX2BQ99453 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHOX2BQ99453 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms