Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.07■□□□□ 0
SPENQ96T58 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.07■□□□□ 0
SPENQ96T58 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.07■□□□□ 0
SPENQ96T58 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SPENQ96T58 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SPENQ96T58 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.07■□□□□ 0
SPENQ96T58 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
SPENQ96T58 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SPENQ96T58 KRT18P55-202ENST00000578578 1546 ntBASIC15.07■□□□□ 0
SPENQ96T58 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.07■□□□□ 0
SPENQ96T58 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.07■□□□□ 0
SPENQ96T58 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.07■□□□□ 0
SPENQ96T58 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.07■□□□□ 0
SPENQ96T58 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 RN7SL752P-201ENST00000463779 287 ntBASIC15.07■□□□□ 0
SPENQ96T58 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.07■□□□□ 0
SPENQ96T58 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.07■□□□□ 0
SPENQ96T58 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.07■□□□□ 0
SPENQ96T58 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.07■□□□□ 0
SPENQ96T58 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
SPENQ96T58 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SPENQ96T58 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.06■□□□□ 0
SPENQ96T58 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SPENQ96T58 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.06■□□□□ 0
SPENQ96T58 HLA-V-204ENST00000476601 1289 ntBASIC15.06■□□□□ 0
SPENQ96T58 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SPENQ96T58 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SPENQ96T58 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.06■□□□□ 0
SPENQ96T58 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.06■□□□□ 0
SPENQ96T58 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.06■□□□□ 0
SPENQ96T58 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SPENQ96T58 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.06■□□□□ 0
SPENQ96T58 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.06■□□□□ 0
SPENQ96T58 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.06■□□□□ 0
SPENQ96T58 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.06■□□□□ 0
SPENQ96T58 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.06■□□□□ 0
SPENQ96T58 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 AC073389.1-201ENST00000595595 795 ntBASIC15.06■□□□□ 0
SPENQ96T58 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.06■□□□□ 0
SPENQ96T58 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.06■□□□□ 0
SPENQ96T58 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SPENQ96T58 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SPENQ96T58 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.06■□□□□ 0
SPENQ96T58 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.06■□□□□ 0
SPENQ96T58 ELK1P1-201ENST00000485699 580 ntBASIC15.06■□□□□ 0
SPENQ96T58 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SPENQ96T58 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.06■□□□□ 0
SPENQ96T58 AL138781.2-201ENST00000617896 1843 ntBASIC15.05■□□□□ 0
SPENQ96T58 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.05■□□□□ 0
SPENQ96T58 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.05■□□□□ 0
SPENQ96T58 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
SPENQ96T58 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.05■□□□□ 0
SPENQ96T58 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SPENQ96T58 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.05■□□□□ 0
SPENQ96T58 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
SPENQ96T58 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.05■□□□□ 0
SPENQ96T58 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.05■□□□□ 0
SPENQ96T58 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.05■□□□□ 0
SPENQ96T58 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.05■□□□□ 0
SPENQ96T58 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SPENQ96T58 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.05■□□□□ 0
SPENQ96T58 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.05■□□□□ 0
SPENQ96T58 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SPENQ96T58 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SPENQ96T58 AC093525.9-201ENST00000624961 1746 ntBASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms