Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 AC093010.1-201ENST00000473625 1624 ntBASIC14.27□□□□□ -0.13
CSMD1Q96PZ7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 AC135586.1-201ENST00000539323 574 ntBASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 AC007967.4-201ENST00000614700 386 ntBASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 AC142381.1-201ENST00000426099 345 ntBASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 AC011495.1-201ENST00000498085 584 ntBASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 AC093525.8-201ENST00000624099 1342 ntBASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 ACTG1P4-201ENST00000425123 1122 ntBASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 AC133552.6-201ENST00000613406 534 ntBASIC14.26□□□□□ -0.13
CSMD1Q96PZ7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 SLC7A15P-201ENST00000424028 1363 ntBASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 REXO1L11P-201ENST00000620964 1927 ntBASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 AL844908.2-201ENST00000609461 460 ntBASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 AC087499.5-201ENST00000452760 1342 ntBASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 AC079328.2-201ENST00000561241 3354 ntBASIC14.25□□□□□ -0.13
CSMD1Q96PZ7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CSMD1Q96PZ7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms