Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AP1S3Q96PC3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.88□□□□□ -0.35
AP1S3Q96PC3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 AC092865.7-201ENST00000641832 219 ntBASIC12.88□□□□□ -0.35
AP1S3Q96PC3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.88□□□□□ -0.35
AP1S3Q96PC3 AC092338.2-201ENST00000568827 1415 ntBASIC12.88□□□□□ -0.35
AP1S3Q96PC3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 TCAF2P1-201ENST00000291129 2421 ntBASIC12.87□□□□□ -0.35
AP1S3Q96PC3 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 UNC93B2-201ENST00000285383 730 ntBASIC12.87□□□□□ -0.35
AP1S3Q96PC3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 RPS2P55-201ENST00000397318 883 ntBASIC12.87□□□□□ -0.35
AP1S3Q96PC3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 AC107956.1-201ENST00000494359 873 ntBASIC12.87□□□□□ -0.35
AP1S3Q96PC3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 AC026471.5-201ENST00000615068 467 ntBASIC12.87□□□□□ -0.35
AP1S3Q96PC3 AC113410.3-201ENST00000623366 203 ntBASIC12.87□□□□□ -0.35
AP1S3Q96PC3 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms