Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFT43Q96FT9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
IFT43Q96FT9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFT43Q96FT9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFT43Q96FT9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFT43Q96FT9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFT43Q96FT9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
IFT43Q96FT9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
IFT43Q96FT9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFT43Q96FT9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFT43Q96FT9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFT43Q96FT9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.52■□□□□ 0.39
IFT43Q96FT9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFT43Q96FT9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT43Q96FT9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT43Q96FT9 AL121761.2-201ENST00000598007 1648 ntBASIC17.51■□□□□ 0.39
IFT43Q96FT9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT43Q96FT9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT43Q96FT9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT43Q96FT9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFT43Q96FT9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT43Q96FT9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFT43Q96FT9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 OR7E14P-202ENST00000530490 1290 ntBASIC17.51■□□□□ 0.39
IFT43Q96FT9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT43Q96FT9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFT43Q96FT9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFT43Q96FT9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT43Q96FT9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT43Q96FT9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.51■□□□□ 0.39
IFT43Q96FT9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFT43Q96FT9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT43Q96FT9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT43Q96FT9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT43Q96FT9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
IFT43Q96FT9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT43Q96FT9 AC097637.2-201ENST00000624096 1997 ntBASIC17.5■□□□□ 0.39
IFT43Q96FT9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.5■□□□□ 0.39
IFT43Q96FT9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.5■□□□□ 0.39
IFT43Q96FT9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IFT43Q96FT9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.5■□□□□ 0.39
IFT43Q96FT9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
IFT43Q96FT9 IGHV3-22-201ENST00000520721 359 ntBASIC17.5■□□□□ 0.39
IFT43Q96FT9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.5■□□□□ 0.39
IFT43Q96FT9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.5■□□□□ 0.39
IFT43Q96FT9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.5■□□□□ 0.39
IFT43Q96FT9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.5■□□□□ 0.39
IFT43Q96FT9 AC025062.2-201ENST00000605477 670 ntBASIC17.5■□□□□ 0.39
IFT43Q96FT9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
IFT43Q96FT9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
IFT43Q96FT9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT43Q96FT9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
IFT43Q96FT9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT43Q96FT9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
IFT43Q96FT9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT43Q96FT9 AC004817.3-201ENST00000602957 2129 ntBASIC17.5■□□□□ 0.39
IFT43Q96FT9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT43Q96FT9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT43Q96FT9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 RPS2P1-201ENST00000434010 821 ntBASIC17.49■□□□□ 0.39
IFT43Q96FT9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
IFT43Q96FT9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.49■□□□□ 0.39
IFT43Q96FT9 NKAPP1-205ENST00000585790 367 ntBASIC17.49■□□□□ 0.39
IFT43Q96FT9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms