Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.06■□□□□ 0.64
USP6NLQ92738 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP6NLQ92738 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
USP6NLQ92738 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.06■□□□□ 0.64
USP6NLQ92738 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP6NLQ92738 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP6NLQ92738 AC009477.1-201ENST00000452936 217 ntBASIC19.06■□□□□ 0.64
USP6NLQ92738 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP6NLQ92738 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.06■□□□□ 0.64
USP6NLQ92738 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP6NLQ92738 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.06■□□□□ 0.64
USP6NLQ92738 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.06■□□□□ 0.64
USP6NLQ92738 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.06■□□□□ 0.64
USP6NLQ92738 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
USP6NLQ92738 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
USP6NLQ92738 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP6NLQ92738 AC018470.1-201ENST00000624790 3129 ntBASIC19.06■□□□□ 0.64
USP6NLQ92738 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
USP6NLQ92738 EGFEM1P-202ENST00000431685 1563 ntBASIC19.06■□□□□ 0.64
USP6NLQ92738 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.06■□□□□ 0.64
USP6NLQ92738 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.06■□□□□ 0.64
USP6NLQ92738 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP6NLQ92738 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.06■□□□□ 0.64
USP6NLQ92738 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.05■□□□□ 0.64
USP6NLQ92738 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.05■□□□□ 0.64
USP6NLQ92738 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
USP6NLQ92738 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
USP6NLQ92738 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 LINC00895-201ENST00000629028 1637 ntBASIC19.05■□□□□ 0.64
USP6NLQ92738 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
USP6NLQ92738 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
USP6NLQ92738 SLC25A1P3-201ENST00000395415 828 ntBASIC19.05■□□□□ 0.64
USP6NLQ92738 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 HLA-V-204ENST00000476601 1289 ntBASIC19.05■□□□□ 0.64
USP6NLQ92738 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.05■□□□□ 0.64
USP6NLQ92738 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.05■□□□□ 0.64
USP6NLQ92738 AC105233.2-201ENST00000523697 349 ntBASIC19.05■□□□□ 0.64
USP6NLQ92738 AF228730.5-201ENST00000530288 346 ntBASIC19.05■□□□□ 0.64
USP6NLQ92738 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.05■□□□□ 0.64
USP6NLQ92738 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.05■□□□□ 0.64
USP6NLQ92738 AL359881.2-201ENST00000602973 570 ntBASIC19.05■□□□□ 0.64
USP6NLQ92738 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.05■□□□□ 0.64
USP6NLQ92738 AC131009.4-201ENST00000624048 1740 ntBASIC19.05■□□□□ 0.64
USP6NLQ92738 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
USP6NLQ92738 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 FOXO1B-201ENST00000504678 1527 ntBASIC19.05■□□□□ 0.64
USP6NLQ92738 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
USP6NLQ92738 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6NLQ92738 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.05■□□□□ 0.64
USP6NLQ92738 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.04■□□□□ 0.64
USP6NLQ92738 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
USP6NLQ92738 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
USP6NLQ92738 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.04■□□□□ 0.64
USP6NLQ92738 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.04■□□□□ 0.64
USP6NLQ92738 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.04■□□□□ 0.64
USP6NLQ92738 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.04■□□□□ 0.64
USP6NLQ92738 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.04■□□□□ 0.64
USP6NLQ92738 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.04■□□□□ 0.64
USP6NLQ92738 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.04■□□□□ 0.64
USP6NLQ92738 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 AP001350.2-201ENST00000625104 1094 ntBASIC19.04■□□□□ 0.64
USP6NLQ92738 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.04■□□□□ 0.64
USP6NLQ92738 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.04■□□□□ 0.64
USP6NLQ92738 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP6NLQ92738 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.03■□□□□ 0.64
USP6NLQ92738 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP6NLQ92738 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.03■□□□□ 0.64
USP6NLQ92738 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP6NLQ92738 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms