Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC142086.2-201ENST00000569753 217 ntBASIC14.99□□□□□ -0.01
AP3S1Q92572 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S1Q92572 AL109923.1-201ENST00000618799 583 ntBASIC14.99□□□□□ -0.01
AP3S1Q92572 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S1Q92572 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
AP3S1Q92572 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S1Q92572 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
AP3S1Q92572 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
AP3S1Q92572 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.98□□□□□ -0.01
AP3S1Q92572 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.98□□□□□ -0.01
AP3S1Q92572 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.98□□□□□ -0.01
AP3S1Q92572 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 CCR12P-201ENST00000446203 998 ntBASIC14.98□□□□□ -0.01
AP3S1Q92572 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.98□□□□□ -0.01
AP3S1Q92572 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.98□□□□□ -0.01
AP3S1Q92572 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.98□□□□□ -0.01
AP3S1Q92572 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.98□□□□□ -0.01
AP3S1Q92572 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.98□□□□□ -0.01
AP3S1Q92572 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.98□□□□□ -0.01
AP3S1Q92572 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 CD177P1-201ENST00000606252 935 ntBASIC14.98□□□□□ -0.01
AP3S1Q92572 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.98□□□□□ -0.01
AP3S1Q92572 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.98□□□□□ -0.01
AP3S1Q92572 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.98□□□□□ -0.01
AP3S1Q92572 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
AP3S1Q92572 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AP3S1Q92572 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.98□□□□□ -0.01
AP3S1Q92572 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
AP3S1Q92572 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
AP3S1Q92572 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.97□□□□□ -0.01
AP3S1Q92572 GPR89P-201ENST00000407924 1495 ntBASIC14.97□□□□□ -0.01
AP3S1Q92572 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.97□□□□□ -0.01
AP3S1Q92572 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
AP3S1Q92572 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.97□□□□□ -0.01
AP3S1Q92572 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.97□□□□□ -0.01
AP3S1Q92572 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 NUDT16P1-203ENST00000513809 620 ntBASIC14.97□□□□□ -0.01
AP3S1Q92572 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.97□□□□□ -0.01
AP3S1Q92572 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.97□□□□□ -0.01
AP3S1Q92572 AP005242.2-201ENST00000580065 1175 ntBASIC14.97□□□□□ -0.01
AP3S1Q92572 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.97□□□□□ -0.01
AP3S1Q92572 AC024243.1-201ENST00000609234 778 ntBASIC14.97□□□□□ -0.01
AP3S1Q92572 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.97□□□□□ -0.01
AP3S1Q92572 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
AP3S1Q92572 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
AP3S1Q92572 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.97□□□□□ -0.01
AP3S1Q92572 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.97□□□□□ -0.01
AP3S1Q92572 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
AP3S1Q92572 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
AP3S1Q92572 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.96□□□□□ -0.01
AP3S1Q92572 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.96□□□□□ -0.01
AP3S1Q92572 AL596087.1-201ENST00000400979 1969 ntBASIC14.96□□□□□ -0.01
AP3S1Q92572 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AP3S1Q92572 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.96□□□□□ -0.01
AP3S1Q92572 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms