Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU1-129P-201ENST00000384064 167 ntBASIC22.03■■□□□ 1.12
RTF1Q92541 TFAMP1-201ENST00000412727 736 ntBASIC22.03■■□□□ 1.12
RTF1Q92541 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTF1Q92541 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTF1Q92541 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTF1Q92541 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC22.03■■□□□ 1.12
RTF1Q92541 AC109635.5-201ENST00000533593 962 ntBASIC22.03■■□□□ 1.12
RTF1Q92541 RARRES2P8-201ENST00000566335 367 ntBASIC22.03■■□□□ 1.12
RTF1Q92541 U1.21-201ENST00000580816 167 ntBASIC22.03■■□□□ 1.12
RTF1Q92541 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.03■■□□□ 1.12
RTF1Q92541 AL031055.1-201ENST00000606362 631 ntBASIC22.03■■□□□ 1.12
RTF1Q92541 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.03■■□□□ 1.12
RTF1Q92541 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC22.03■■□□□ 1.12
RTF1Q92541 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTF1Q92541 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RTF1Q92541 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
RTF1Q92541 TUBB8P12-201ENST00000308911 1335 ntBASIC22.03■■□□□ 1.12
RTF1Q92541 TUBB7P-202ENST00000428444 1305 ntBASIC22.03■■□□□ 1.12
RTF1Q92541 TUBB8P7-204ENST00000567960 1332 ntBASIC22.03■■□□□ 1.12
RTF1Q92541 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC22.03■■□□□ 1.12
RTF1Q92541 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC22.03■■□□□ 1.12
RTF1Q92541 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTF1Q92541 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTF1Q92541 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC22.02■■□□□ 1.12
RTF1Q92541 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTF1Q92541 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC22.02■■□□□ 1.12
RTF1Q92541 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
RTF1Q92541 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTF1Q92541 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTF1Q92541 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC22.02■■□□□ 1.12
RTF1Q92541 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC22.02■■□□□ 1.12
RTF1Q92541 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTF1Q92541 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTF1Q92541 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTF1Q92541 AC092474.2-201ENST00000424288 719 ntBASIC22.02■■□□□ 1.12
RTF1Q92541 KRT8P48-201ENST00000515599 1220 ntBASIC22.02■■□□□ 1.12
RTF1Q92541 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC22.02■■□□□ 1.12
RTF1Q92541 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC22.02■■□□□ 1.12
RTF1Q92541 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC22.02■■□□□ 1.12
RTF1Q92541 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC22.02■■□□□ 1.12
RTF1Q92541 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
RTF1Q92541 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RTF1Q92541 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RTF1Q92541 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC22.02■■□□□ 1.12
RTF1Q92541 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
RTF1Q92541 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
RTF1Q92541 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC22.01■■□□□ 1.11
RTF1Q92541 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTF1Q92541 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTF1Q92541 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC22.01■■□□□ 1.11
RTF1Q92541 AC108860.2-201ENST00000562760 2183 ntBASIC22.01■■□□□ 1.11
RTF1Q92541 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTF1Q92541 LETM1P2-201ENST00000597330 2178 ntBASIC22.01■■□□□ 1.11
RTF1Q92541 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTF1Q92541 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTF1Q92541 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RTF1Q92541 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.01■■□□□ 1.11
RTF1Q92541 RN7SL589P-201ENST00000481268 310 ntBASIC22.01■■□□□ 1.11
RTF1Q92541 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
RTF1Q92541 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
RTF1Q92541 AC027796.2-201ENST00000575326 344 ntBASIC22.01■■□□□ 1.11
RTF1Q92541 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC22.01■■□□□ 1.11
RTF1Q92541 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC22.01■■□□□ 1.11
RTF1Q92541 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RTF1Q92541 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RTF1Q92541 AKAP8P1-201ENST00000434743 1349 ntBASIC22.01■■□□□ 1.11
RTF1Q92541 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC22.01■■□□□ 1.11
RTF1Q92541 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC22.01■■□□□ 1.11
RTF1Q92541 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RTF1Q92541 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTF1Q92541 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTF1Q92541 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC22■■□□□ 1.11
RTF1Q92541 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTF1Q92541 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTF1Q92541 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC22■■□□□ 1.11
RTF1Q92541 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTF1Q92541 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTF1Q92541 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC22■■□□□ 1.11
RTF1Q92541 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTF1Q92541 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22■■□□□ 1.11
RTF1Q92541 AL135744.1-201ENST00000565098 629 ntBASIC22■■□□□ 1.11
RTF1Q92541 CYP2A7P1-201ENST00000595391 815 ntBASIC22■■□□□ 1.11
RTF1Q92541 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC22■■□□□ 1.11
RTF1Q92541 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC22■■□□□ 1.11
RTF1Q92541 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTF1Q92541 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTF1Q92541 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RTF1Q92541 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC22■■□□□ 1.11
RTF1Q92541 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC22■■□□□ 1.11
RTF1Q92541 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
RTF1Q92541 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RTF1Q92541 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RTF1Q92541 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RTF1Q92541 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RTF1Q92541 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.99■■□□□ 1.11
RTF1Q92541 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.99■■□□□ 1.11
RTF1Q92541 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RTF1Q92541 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms