Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 AC092183.1-201ENST00000469884 875 ntBASIC19.88■□□□□ 0.77
STAG1Q8WVM7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 AC068137.2-201ENST00000605408 478 ntBASIC19.88■□□□□ 0.77
STAG1Q8WVM7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 C20orf181-201ENST00000623918 480 ntBASIC19.88■□□□□ 0.77
STAG1Q8WVM7 AP001350.2-201ENST00000625104 1094 ntBASIC19.88■□□□□ 0.77
STAG1Q8WVM7 AC134684.3-201ENST00000641758 218 ntBASIC19.88■□□□□ 0.77
STAG1Q8WVM7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
STAG1Q8WVM7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 AC092919.2-201ENST00000623631 1645 ntBASIC19.87■□□□□ 0.77
STAG1Q8WVM7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 AC078925.2-201ENST00000624013 1973 ntBASIC19.87■□□□□ 0.77
STAG1Q8WVM7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 AC140658.5-201ENST00000438532 169 ntBASIC19.87■□□□□ 0.77
STAG1Q8WVM7 AC004967.1-201ENST00000453589 447 ntBASIC19.87■□□□□ 0.77
STAG1Q8WVM7 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.87■□□□□ 0.77
STAG1Q8WVM7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
STAG1Q8WVM7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 YBX1P5-201ENST00000509441 847 ntBASIC19.86■□□□□ 0.77
STAG1Q8WVM7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 AP002472.1-201ENST00000577490 586 ntBASIC19.86■□□□□ 0.77
STAG1Q8WVM7 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.86■□□□□ 0.77
STAG1Q8WVM7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 AL139011.1-202ENST00000642063 584 ntBASIC19.86■□□□□ 0.77
STAG1Q8WVM7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
STAG1Q8WVM7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 RNF216P1-203ENST00000404404 2427 ntBASIC19.85■□□□□ 0.77
STAG1Q8WVM7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
STAG1Q8WVM7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms