Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GPR89P-201ENST00000407924 1495 ntBASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 VN2R19P-201ENST00000442399 1052 ntBASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 AC112482.1-201ENST00000492080 688 ntBASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 AL353135.1-201ENST00000606729 504 ntBASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 AC004790.2-201ENST00000623588 572 ntBASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDND2Q8NHS1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.46□□□□□ -0.1
CLDND2Q8NHS1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDND2Q8NHS1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
CLDND2Q8NHS1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.46□□□□□ -0.1
CLDND2Q8NHS1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.46□□□□□ -0.1
CLDND2Q8NHS1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.46□□□□□ -0.1
CLDND2Q8NHS1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
CLDND2Q8NHS1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CLDND2Q8NHS1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 PTCHD3P3-201ENST00000403073 906 ntBASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 AC092183.1-201ENST00000469884 875 ntBASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 MTDHP5-201ENST00000598980 586 ntBASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDND2Q8NHS1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 MRPL20P1-201ENST00000400819 433 ntBASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 PRSS29P-201ENST00000440800 595 ntBASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 HCG4B-203ENST00000450128 991 ntBASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDND2Q8NHS1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms