Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 AC020916.1-201ENST00000587762 1774 ntBASIC18.17■□□□□ 0.5
BEST2Q8NFU1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 AL121761.2-201ENST00000598007 1648 ntBASIC18.17■□□□□ 0.5
BEST2Q8NFU1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 AC002056.1-201ENST00000395613 760 ntBASIC18.17■□□□□ 0.5
BEST2Q8NFU1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 DNAJB3-202ENST00000449667 1266 ntBASIC18.17■□□□□ 0.5
BEST2Q8NFU1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 AC112191.1-201ENST00000523689 701 ntBASIC18.17■□□□□ 0.5
BEST2Q8NFU1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 MIR4469-201ENST00000583919 79 ntBASIC18.17■□□□□ 0.5
BEST2Q8NFU1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST2Q8NFU1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 ELL2P1-201ENST00000413990 1906 ntBASIC18.16■□□□□ 0.5
BEST2Q8NFU1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 ACTG1P14-201ENST00000446382 1122 ntBASIC18.16■□□□□ 0.5
BEST2Q8NFU1 CEND1P1-201ENST00000451006 455 ntBASIC18.16■□□□□ 0.5
BEST2Q8NFU1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST2Q8NFU1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms