Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF44Q7L0R7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF44Q7L0R7 ACTL9-202ENST00000612068 1252 ntBASIC16.25■□□□□ 0.19
RNF44Q7L0R7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF44Q7L0R7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF44Q7L0R7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
RNF44Q7L0R7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF44Q7L0R7 AC092053.1-201ENST00000605787 1936 ntBASIC16.25■□□□□ 0.19
RNF44Q7L0R7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RNF44Q7L0R7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RNF44Q7L0R7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RNF44Q7L0R7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.25■□□□□ 0.19
RNF44Q7L0R7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF44Q7L0R7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RNF44Q7L0R7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RNF44Q7L0R7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RNF44Q7L0R7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 AC108860.2-201ENST00000562760 2183 ntBASIC16.24■□□□□ 0.19
RNF44Q7L0R7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 RHOQP3-201ENST00000437982 621 ntBASIC16.24■□□□□ 0.19
RNF44Q7L0R7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF44Q7L0R7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 FLJ16779-201ENST00000612722 7638 ntBASIC16.23■□□□□ 0.19
RNF44Q7L0R7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 AC040169.1-201ENST00000565382 521 ntBASIC16.23■□□□□ 0.19
RNF44Q7L0R7 AC018845.2-201ENST00000568326 409 ntBASIC16.23■□□□□ 0.19
RNF44Q7L0R7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 TOP3BP1-201ENST00000420768 1380 ntBASIC16.23■□□□□ 0.19
RNF44Q7L0R7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF44Q7L0R7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF44Q7L0R7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms