Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 SLC25A39P2-201ENST00000537614 270 ntBASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 U1.21-201ENST00000580816 167 ntBASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 AL021920.2-201ENST00000624828 1351 ntBASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC149Q6ZUS6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 AL512638.1-201ENST00000457493 794 ntBASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 LINC01225-203ENST00000563550 1244 ntBASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 AC026150.2-201ENST00000564693 1156 ntBASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC149Q6ZUS6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 MIR661-201ENST00000384842 89 ntBASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 UGT1A2P-201ENST00000454886 866 ntBASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 AL158211.3-201ENST00000607385 239 ntBASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 AC008761.3-201ENST00000624803 892 ntBASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 AC008677.1-201ENST00000519230 1561 ntBASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 SLC22A20-204ENST00000530038 1673 ntBASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC149Q6ZUS6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 GK-202ENST00000378941 458 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 SPDYE14P-201ENST00000442619 822 ntBASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms