Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDLRAP1Q5SW96 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.89■□□□□ 0.3
LDLRAP1Q5SW96 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LDLRAP1Q5SW96 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
LDLRAP1Q5SW96 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 PRSS29P-201ENST00000440800 595 ntBASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 AC087163.2-201ENST00000457299 853 ntBASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 ZNF259P1-201ENST00000407656 1365 ntBASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LDLRAP1Q5SW96 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 AC104109.2-201ENST00000602919 1418 ntBASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 MIR4751-201ENST00000578027 74 ntBASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 AC010654.1-201ENST00000615722 808 ntBASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 AC004790.2-201ENST00000623588 572 ntBASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDLRAP1Q5SW96 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms