Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.59■□□□□ 0.89
TNNI3KQ59H18 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 MIR4469-201ENST00000583919 79 ntBASIC20.59■□□□□ 0.89
TNNI3KQ59H18 RNF216P1-203ENST00000404404 2427 ntBASIC20.59■□□□□ 0.89
TNNI3KQ59H18 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNNI3KQ59H18 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.58■□□□□ 0.89
TNNI3KQ59H18 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 AC112191.1-201ENST00000523689 701 ntBASIC20.58■□□□□ 0.89
TNNI3KQ59H18 AP002490.2-201ENST00000524791 560 ntBASIC20.58■□□□□ 0.89
TNNI3KQ59H18 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.58■□□□□ 0.89
TNNI3KQ59H18 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.58■□□□□ 0.89
TNNI3KQ59H18 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.58■□□□□ 0.88
TNNI3KQ59H18 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNNI3KQ59H18 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TNNI3KQ59H18 ELL2P1-201ENST00000413990 1906 ntBASIC20.58■□□□□ 0.88
TNNI3KQ59H18 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.58■□□□□ 0.88
TNNI3KQ59H18 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.58■□□□□ 0.88
TNNI3KQ59H18 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TNNI3KQ59H18 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNNI3KQ59H18 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNNI3KQ59H18 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TNNI3KQ59H18 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.58■□□□□ 0.88
TNNI3KQ59H18 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
TNNI3KQ59H18 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.58■□□□□ 0.88
TNNI3KQ59H18 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNNI3KQ59H18 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TNNI3KQ59H18 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 AC002056.1-201ENST00000395613 760 ntBASIC20.57■□□□□ 0.88
TNNI3KQ59H18 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 AC109635.5-201ENST00000533593 962 ntBASIC20.57■□□□□ 0.88
TNNI3KQ59H18 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 AC078925.2-201ENST00000624013 1973 ntBASIC20.57■□□□□ 0.88
TNNI3KQ59H18 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNNI3KQ59H18 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNNI3KQ59H18 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNNI3KQ59H18 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNNI3KQ59H18 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TNNI3KQ59H18 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms