Protein–RNA interactions for Protein: Q09161

NCBP1, Nuclear cap-binding protein subunit 1, humanhuman

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1Q09161 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.27■□□□□ 0.68
NCBP1Q09161 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NCBP1Q09161 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
NCBP1Q09161 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.27■□□□□ 0.68
NCBP1Q09161 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
NCBP1Q09161 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.27■□□□□ 0.68
NCBP1Q09161 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.27■□□□□ 0.68
NCBP1Q09161 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCBP1Q09161 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.27■□□□□ 0.68
NCBP1Q09161 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.27■□□□□ 0.68
NCBP1Q09161 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NCBP1Q09161 AL020989.1-201ENST00000422979 469 ntBASIC19.27■□□□□ 0.68
NCBP1Q09161 RPS2P1-201ENST00000434010 821 ntBASIC19.27■□□□□ 0.68
NCBP1Q09161 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.27■□□□□ 0.68
NCBP1Q09161 RNA5SP419-201ENST00000515908 135 ntBASIC19.27■□□□□ 0.68
NCBP1Q09161 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.27■□□□□ 0.68
NCBP1Q09161 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCBP1Q09161 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCBP1Q09161 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.27■□□□□ 0.68
NCBP1Q09161 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.27■□□□□ 0.68
NCBP1Q09161 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NCBP1Q09161 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NCBP1Q09161 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NCBP1Q09161 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.27■□□□□ 0.67
NCBP1Q09161 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.27■□□□□ 0.67
NCBP1Q09161 AL353593.2-201ENST00000602529 1483 ntBASIC19.27■□□□□ 0.67
NCBP1Q09161 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NCBP1Q09161 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
NCBP1Q09161 AL049757.1-201ENST00000616842 1596 ntBASIC19.27■□□□□ 0.67
NCBP1Q09161 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCBP1Q09161 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
NCBP1Q09161 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NCBP1Q09161 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
NCBP1Q09161 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCBP1Q09161 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NCBP1Q09161 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NCBP1Q09161 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCBP1Q09161 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.26■□□□□ 0.67
NCBP1Q09161 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCBP1Q09161 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NCBP1Q09161 SIGLEC16-201ENST00000599858 1437 ntBASIC19.26■□□□□ 0.67
NCBP1Q09161 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
NCBP1Q09161 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NCBP1Q09161 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NCBP1Q09161 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.26■□□□□ 0.67
NCBP1Q09161 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCBP1Q09161 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
NCBP1Q09161 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.26■□□□□ 0.67
NCBP1Q09161 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NCBP1Q09161 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCBP1Q09161 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.26■□□□□ 0.67
NCBP1Q09161 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.26■□□□□ 0.67
NCBP1Q09161 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.26■□□□□ 0.67
NCBP1Q09161 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.26■□□□□ 0.67
NCBP1Q09161 AC109462.3-201ENST00000573934 613 ntBASIC19.26■□□□□ 0.67
NCBP1Q09161 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
NCBP1Q09161 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCBP1Q09161 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.26■□□□□ 0.67
NCBP1Q09161 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.26■□□□□ 0.67
NCBP1Q09161 AC073592.4-201ENST00000623827 446 ntBASIC19.26■□□□□ 0.67
NCBP1Q09161 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
NCBP1Q09161 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NCBP1Q09161 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCBP1Q09161 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NCBP1Q09161 AC133963.1-201ENST00000504166 1679 ntBASIC19.26■□□□□ 0.67
NCBP1Q09161 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCBP1Q09161 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.26■□□□□ 0.67
NCBP1Q09161 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NCBP1Q09161 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NCBP1Q09161 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.26■□□□□ 0.67
NCBP1Q09161 IL9RP2-201ENST00000423948 1312 ntBASIC19.25■□□□□ 0.67
NCBP1Q09161 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCBP1Q09161 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NCBP1Q09161 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCBP1Q09161 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCBP1Q09161 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
NCBP1Q09161 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCBP1Q09161 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCBP1Q09161 AC003669.1-201ENST00000334569 611 ntBASIC19.25■□□□□ 0.67
NCBP1Q09161 MYCLP1-201ENST00000372451 1075 ntBASIC19.25■□□□□ 0.67
NCBP1Q09161 SPDYE21P-201ENST00000413323 827 ntBASIC19.25■□□□□ 0.67
NCBP1Q09161 HNRNPDP1-201ENST00000439535 754 ntBASIC19.25■□□□□ 0.67
NCBP1Q09161 BX005266.1-201ENST00000473402 457 ntBASIC19.25■□□□□ 0.67
NCBP1Q09161 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.25■□□□□ 0.67
NCBP1Q09161 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NCBP1Q09161 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCBP1Q09161 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NCBP1Q09161 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCBP1Q09161 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCBP1Q09161 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCBP1Q09161 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.25■□□□□ 0.67
NCBP1Q09161 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCBP1Q09161 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCBP1Q09161 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCBP1Q09161 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NCBP1Q09161 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.25■□□□□ 0.67
NCBP1Q09161 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NCBP1Q09161 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms