Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
GABPAQ06546 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GABPAQ06546 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GABPAQ06546 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.76■□□□□ 0.75
GABPAQ06546 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GABPAQ06546 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GABPAQ06546 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
GABPAQ06546 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.76■□□□□ 0.75
GABPAQ06546 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GABPAQ06546 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GABPAQ06546 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.76■□□□□ 0.75
GABPAQ06546 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GABPAQ06546 KRT18P32-201ENST00000424695 1287 ntBASIC19.76■□□□□ 0.75
GABPAQ06546 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.76■□□□□ 0.75
GABPAQ06546 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
GABPAQ06546 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.76■□□□□ 0.75
GABPAQ06546 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.76■□□□□ 0.75
GABPAQ06546 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.76■□□□□ 0.75
GABPAQ06546 AP001059.3-201ENST00000619053 235 ntBASIC19.76■□□□□ 0.75
GABPAQ06546 AC008267.7-201ENST00000624570 1194 ntBASIC19.76■□□□□ 0.75
GABPAQ06546 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
GABPAQ06546 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.76■□□□□ 0.75
GABPAQ06546 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.76■□□□□ 0.75
GABPAQ06546 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
GABPAQ06546 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
GABPAQ06546 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.76■□□□□ 0.75
GABPAQ06546 AC006277.1-201ENST00000624348 1610 ntBASIC19.76■□□□□ 0.75
GABPAQ06546 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GABPAQ06546 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
GABPAQ06546 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GABPAQ06546 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GABPAQ06546 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.75■□□□□ 0.75
GABPAQ06546 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.75■□□□□ 0.75
GABPAQ06546 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
GABPAQ06546 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.75■□□□□ 0.75
GABPAQ06546 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
GABPAQ06546 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.75■□□□□ 0.75
GABPAQ06546 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.75■□□□□ 0.75
GABPAQ06546 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
GABPAQ06546 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.75■□□□□ 0.75
GABPAQ06546 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.75■□□□□ 0.75
GABPAQ06546 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.75■□□□□ 0.75
GABPAQ06546 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.75■□□□□ 0.75
GABPAQ06546 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.75■□□□□ 0.75
GABPAQ06546 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
GABPAQ06546 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GABPAQ06546 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
GABPAQ06546 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
GABPAQ06546 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.74■□□□□ 0.75
GABPAQ06546 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.74■□□□□ 0.75
GABPAQ06546 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GABPAQ06546 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.74■□□□□ 0.75
GABPAQ06546 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GABPAQ06546 AL023806.1-201ENST00000603994 1649 ntBASIC19.74■□□□□ 0.75
GABPAQ06546 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.74■□□□□ 0.75
GABPAQ06546 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GABPAQ06546 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.74■□□□□ 0.75
GABPAQ06546 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.74■□□□□ 0.75
GABPAQ06546 AP000842.3-202ENST00000569238 1080 ntBASIC19.74■□□□□ 0.75
GABPAQ06546 AC021097.1-201ENST00000607902 574 ntBASIC19.74■□□□□ 0.75
GABPAQ06546 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
GABPAQ06546 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.74■□□□□ 0.75
GABPAQ06546 Z92544.3-201ENST00000624747 417 ntBASIC19.74■□□□□ 0.75
GABPAQ06546 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.74■□□□□ 0.75
GABPAQ06546 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GABPAQ06546 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GABPAQ06546 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
GABPAQ06546 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
GABPAQ06546 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GABPAQ06546 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.74■□□□□ 0.75
GABPAQ06546 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GABPAQ06546 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
GABPAQ06546 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.74■□□□□ 0.75
GABPAQ06546 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GABPAQ06546 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.74■□□□□ 0.75
GABPAQ06546 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
GABPAQ06546 PCDHB17P-201ENST00000539533 2393 ntBASIC19.73■□□□□ 0.75
GABPAQ06546 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
GABPAQ06546 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GABPAQ06546 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GABPAQ06546 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GABPAQ06546 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GABPAQ06546 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GABPAQ06546 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.73■□□□□ 0.75
GABPAQ06546 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
GABPAQ06546 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms