Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.99□□□□□ -0.01
NKX6-1P78426 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX6-1P78426 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX6-1P78426 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX6-1P78426 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX6-1P78426 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX6-1P78426 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
NKX6-1P78426 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX6-1P78426 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.99□□□□□ -0.01
NKX6-1P78426 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
NKX6-1P78426 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX6-1P78426 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.99□□□□□ -0.01
NKX6-1P78426 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX6-1P78426 CRYGEP-201ENST00000412192 528 ntBASIC14.99□□□□□ -0.01
NKX6-1P78426 FAM8A3P-201ENST00000427218 844 ntBASIC14.99□□□□□ -0.01
NKX6-1P78426 KRT18P27-201ENST00000427733 1299 ntBASIC14.99□□□□□ -0.01
NKX6-1P78426 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX6-1P78426 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX6-1P78426 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX6-1P78426 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.99□□□□□ -0.01
NKX6-1P78426 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX6-1P78426 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX6-1P78426 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX6-1P78426 AL391005.1-201ENST00000623953 2435 ntBASIC14.99□□□□□ -0.01
NKX6-1P78426 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX6-1P78426 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX6-1P78426 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NKX6-1P78426 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
NKX6-1P78426 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NKX6-1P78426 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NKX6-1P78426 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.98□□□□□ -0.01
NKX6-1P78426 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NKX6-1P78426 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 AC073621.1-201ENST00000392730 636 ntBASIC14.98□□□□□ -0.01
NKX6-1P78426 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
NKX6-1P78426 CNN2P11-201ENST00000429351 262 ntBASIC14.98□□□□□ -0.01
NKX6-1P78426 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.98□□□□□ -0.01
NKX6-1P78426 AP002472.1-201ENST00000577490 586 ntBASIC14.98□□□□□ -0.01
NKX6-1P78426 C20orf181-201ENST00000623918 480 ntBASIC14.98□□□□□ -0.01
NKX6-1P78426 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX6-1P78426 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
NKX6-1P78426 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 NCF1C-201ENST00000438382 1427 ntBASIC14.98□□□□□ -0.01
NKX6-1P78426 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX6-1P78426 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.98□□□□□ -0.01
NKX6-1P78426 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX6-1P78426 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX6-1P78426 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX6-1P78426 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX6-1P78426 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 AC046185.3-201ENST00000623228 1824 ntBASIC14.97□□□□□ -0.01
NKX6-1P78426 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX6-1P78426 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.97□□□□□ -0.01
NKX6-1P78426 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NKX6-1P78426 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX6-1P78426 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.97□□□□□ -0.01
NKX6-1P78426 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.97□□□□□ -0.01
NKX6-1P78426 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.97□□□□□ -0.01
NKX6-1P78426 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NKX6-1P78426 ALG1L5P-201ENST00000482043 771 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms