Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
AP1S1P61966 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP1S1P61966 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP1S1P61966 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP1S1P61966 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP1S1P61966 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
AP1S1P61966 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP1S1P61966 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.02■□□□□ 0.32
AP1S1P61966 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP1S1P61966 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.02■□□□□ 0.32
AP1S1P61966 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.02■□□□□ 0.32
AP1S1P61966 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.02■□□□□ 0.32
AP1S1P61966 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP1S1P61966 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
AP1S1P61966 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP1S1P61966 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP1S1P61966 AC006277.1-201ENST00000624348 1610 ntBASIC17.02■□□□□ 0.31
AP1S1P61966 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
AP1S1P61966 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
AP1S1P61966 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP1S1P61966 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.02■□□□□ 0.31
AP1S1P61966 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP1S1P61966 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP1S1P61966 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 AC105020.1-201ENST00000435356 2205 ntBASIC17.01■□□□□ 0.31
AP1S1P61966 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
AP1S1P61966 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
AP1S1P61966 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.01■□□□□ 0.31
AP1S1P61966 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
AP1S1P61966 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.01■□□□□ 0.31
AP1S1P61966 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 AC023274.1-201ENST00000418278 595 ntBASIC17.01■□□□□ 0.31
AP1S1P61966 AC004832.2-201ENST00000426397 482 ntBASIC17.01■□□□□ 0.31
AP1S1P61966 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
AP1S1P61966 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.01■□□□□ 0.31
AP1S1P61966 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.01■□□□□ 0.31
AP1S1P61966 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.01■□□□□ 0.31
AP1S1P61966 CYP2A7P1-201ENST00000595391 815 ntBASIC17.01■□□□□ 0.31
AP1S1P61966 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.01■□□□□ 0.31
AP1S1P61966 AL513190.1-201ENST00000621254 727 ntBASIC17.01■□□□□ 0.31
AP1S1P61966 AC092865.6-201ENST00000642101 219 ntBASIC17.01■□□□□ 0.31
AP1S1P61966 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.01■□□□□ 0.31
AP1S1P61966 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.01■□□□□ 0.31
AP1S1P61966 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.01■□□□□ 0.31
AP1S1P61966 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
AP1S1P61966 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
AP1S1P61966 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.01■□□□□ 0.31
AP1S1P61966 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
AP1S1P61966 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.01■□□□□ 0.31
AP1S1P61966 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
AP1S1P61966 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17■□□□□ 0.31
AP1S1P61966 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP1S1P61966 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
AP1S1P61966 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
AP1S1P61966 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17■□□□□ 0.31
AP1S1P61966 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17■□□□□ 0.31
AP1S1P61966 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17■□□□□ 0.31
AP1S1P61966 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP1S1P61966 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP1S1P61966 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
AP1S1P61966 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP1S1P61966 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
AP1S1P61966 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17■□□□□ 0.31
AP1S1P61966 AC074386.1-202ENST00000463561 864 ntBASIC17■□□□□ 0.31
AP1S1P61966 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17■□□□□ 0.31
AP1S1P61966 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17■□□□□ 0.31
AP1S1P61966 MTRF1LP2-201ENST00000506027 1122 ntBASIC17■□□□□ 0.31
AP1S1P61966 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17■□□□□ 0.31
AP1S1P61966 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17■□□□□ 0.31
AP1S1P61966 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17■□□□□ 0.31
AP1S1P61966 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17■□□□□ 0.31
AP1S1P61966 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17■□□□□ 0.31
AP1S1P61966 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17■□□□□ 0.31
AP1S1P61966 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17■□□□□ 0.31
AP1S1P61966 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17■□□□□ 0.31
AP1S1P61966 AC005915.1-201ENST00000624912 2018 ntBASIC17■□□□□ 0.31
AP1S1P61966 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP1S1P61966 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
AP1S1P61966 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
AP1S1P61966 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
AP1S1P61966 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
AP1S1P61966 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP1S1P61966 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17■□□□□ 0.31
AP1S1P61966 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
AP1S1P61966 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms