Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.28■□□□□ 0.2
EPHA4P54764 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
EPHA4P54764 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA4P54764 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA4P54764 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA4P54764 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA4P54764 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
EPHA4P54764 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA4P54764 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.27■□□□□ 0.2
EPHA4P54764 PMS2P4-201ENST00000412466 1052 ntBASIC16.27■□□□□ 0.2
EPHA4P54764 TFAMP1-201ENST00000412727 736 ntBASIC16.27■□□□□ 0.2
EPHA4P54764 AL645939.2-201ENST00000427340 991 ntBASIC16.27■□□□□ 0.2
EPHA4P54764 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA4P54764 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA4P54764 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA4P54764 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
EPHA4P54764 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA4P54764 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.27■□□□□ 0.2
EPHA4P54764 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
EPHA4P54764 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA4P54764 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA4P54764 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA4P54764 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
EPHA4P54764 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA4P54764 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.27■□□□□ 0.19
EPHA4P54764 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
EPHA4P54764 LINC02012-201ENST00000608206 1725 ntBASIC16.27■□□□□ 0.19
EPHA4P54764 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA4P54764 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA4P54764 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.27■□□□□ 0.19
EPHA4P54764 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA4P54764 SLC22A20-204ENST00000530038 1673 ntBASIC16.27■□□□□ 0.19
EPHA4P54764 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
EPHA4P54764 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA4P54764 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA4P54764 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EPHA4P54764 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.27■□□□□ 0.19
EPHA4P54764 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA4P54764 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA4P54764 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA4P54764 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.26■□□□□ 0.19
EPHA4P54764 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.26■□□□□ 0.19
EPHA4P54764 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
EPHA4P54764 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
EPHA4P54764 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.26■□□□□ 0.19
EPHA4P54764 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA4P54764 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 AC131009.4-201ENST00000624048 1740 ntBASIC16.26■□□□□ 0.19
EPHA4P54764 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
EPHA4P54764 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 RNU1-129P-201ENST00000384064 167 ntBASIC16.26■□□□□ 0.19
EPHA4P54764 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
EPHA4P54764 AC092474.2-201ENST00000424288 719 ntBASIC16.26■□□□□ 0.19
EPHA4P54764 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.26■□□□□ 0.19
EPHA4P54764 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.26■□□□□ 0.19
EPHA4P54764 RFPL4AP1-201ENST00000530883 850 ntBASIC16.26■□□□□ 0.19
EPHA4P54764 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
EPHA4P54764 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.26■□□□□ 0.19
EPHA4P54764 AL135744.1-201ENST00000565098 629 ntBASIC16.26■□□□□ 0.19
EPHA4P54764 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.26■□□□□ 0.19
EPHA4P54764 U1.21-201ENST00000580816 167 ntBASIC16.26■□□□□ 0.19
EPHA4P54764 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.26■□□□□ 0.19
EPHA4P54764 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
EPHA4P54764 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA4P54764 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.26■□□□□ 0.19
EPHA4P54764 AL355385.1-201ENST00000606123 409 ntBASIC16.26■□□□□ 0.19
EPHA4P54764 AL031055.1-201ENST00000606362 631 ntBASIC16.26■□□□□ 0.19
EPHA4P54764 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.26■□□□□ 0.19
EPHA4P54764 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA4P54764 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
EPHA4P54764 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA4P54764 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
EPHA4P54764 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
EPHA4P54764 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
EPHA4P54764 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.26■□□□□ 0.19
EPHA4P54764 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
EPHA4P54764 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.26■□□□□ 0.19
EPHA4P54764 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms