Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LBX1P52954 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.83■□□□□ 0.6
LBX1P52954 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.83■□□□□ 0.6
LBX1P52954 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.83■□□□□ 0.6
LBX1P52954 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LBX1P52954 FTH1P14-201ENST00000482930 551 ntBASIC18.83■□□□□ 0.6
LBX1P52954 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LBX1P52954 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
LBX1P52954 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.83■□□□□ 0.6
LBX1P52954 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.83■□□□□ 0.6
LBX1P52954 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.83■□□□□ 0.6
LBX1P52954 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LBX1P52954 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LBX1P52954 MIR6069-201ENST00000620069 79 ntBASIC18.83■□□□□ 0.6
LBX1P52954 AL008638.5-201ENST00000623814 1298 ntBASIC18.83■□□□□ 0.6
LBX1P52954 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.83■□□□□ 0.6
LBX1P52954 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.83■□□□□ 0.6
LBX1P52954 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LBX1P52954 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LBX1P52954 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LBX1P52954 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LBX1P52954 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LBX1P52954 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LBX1P52954 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LBX1P52954 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LBX1P52954 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.83■□□□□ 0.6
LBX1P52954 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.83■□□□□ 0.6
LBX1P52954 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LBX1P52954 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LBX1P52954 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LBX1P52954 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LBX1P52954 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.82■□□□□ 0.6
LBX1P52954 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.82■□□□□ 0.6
LBX1P52954 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LBX1P52954 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LBX1P52954 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LBX1P52954 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.82■□□□□ 0.6
LBX1P52954 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LBX1P52954 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LBX1P52954 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.82■□□□□ 0.6
LBX1P52954 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.82■□□□□ 0.6
LBX1P52954 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.82■□□□□ 0.6
LBX1P52954 AL139327.4-201ENST00000612362 153 ntBASIC18.82■□□□□ 0.6
LBX1P52954 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
LBX1P52954 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LBX1P52954 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.82■□□□□ 0.6
LBX1P52954 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.82■□□□□ 0.6
LBX1P52954 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.82■□□□□ 0.6
LBX1P52954 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LBX1P52954 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LBX1P52954 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.81■□□□□ 0.6
LBX1P52954 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.81■□□□□ 0.6
LBX1P52954 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.81■□□□□ 0.6
LBX1P52954 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.81■□□□□ 0.6
LBX1P52954 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.81■□□□□ 0.6
LBX1P52954 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 AL355864.2-201ENST00000447420 863 ntBASIC18.81■□□□□ 0.6
LBX1P52954 HIST2H2BC-201ENST00000498492 580 ntBASIC18.81■□□□□ 0.6
LBX1P52954 AC068587.3-201ENST00000526613 355 ntBASIC18.81■□□□□ 0.6
LBX1P52954 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.81■□□□□ 0.6
LBX1P52954 PTP4A1P2-201ENST00000546033 454 ntBASIC18.81■□□□□ 0.6
LBX1P52954 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.81■□□□□ 0.6
LBX1P52954 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.81■□□□□ 0.6
LBX1P52954 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
LBX1P52954 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBX1P52954 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.81■□□□□ 0.6
LBX1P52954 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.81■□□□□ 0.6
LBX1P52954 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
LBX1P52954 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LBX1P52954 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.8■□□□□ 0.6
LBX1P52954 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.8■□□□□ 0.6
LBX1P52954 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LBX1P52954 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.8■□□□□ 0.6
LBX1P52954 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
LBX1P52954 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.8■□□□□ 0.6
LBX1P52954 BX284668.4-201ENST00000453917 508 ntBASIC18.8■□□□□ 0.6
LBX1P52954 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 IMP3P2-201ENST00000489760 475 ntBASIC18.8■□□□□ 0.6
LBX1P52954 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LBX1P52954 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms