Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC11.49□□□□□ -0.57
CXCL5P42830 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC11.49□□□□□ -0.57
CXCL5P42830 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC11.49□□□□□ -0.57
CXCL5P42830 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.49□□□□□ -0.57
CXCL5P42830 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.49□□□□□ -0.57
CXCL5P42830 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
CXCL5P42830 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC11.49□□□□□ -0.57
CXCL5P42830 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CXCL5P42830 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.49□□□□□ -0.57
CXCL5P42830 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.49□□□□□ -0.57
CXCL5P42830 AC109462.3-201ENST00000573934 613 ntBASIC11.49□□□□□ -0.57
CXCL5P42830 MIR4497-201ENST00000583208 89 ntBASIC11.49□□□□□ -0.57
CXCL5P42830 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 AC079602.3-201ENST00000623931 403 ntBASIC11.49□□□□□ -0.57
CXCL5P42830 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CXCL5P42830 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CXCL5P42830 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CXCL5P42830 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11.49□□□□□ -0.57
CXCL5P42830 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.49□□□□□ -0.57
CXCL5P42830 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CXCL5P42830 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.48□□□□□ -0.57
CXCL5P42830 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
CXCL5P42830 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC11.48□□□□□ -0.57
CXCL5P42830 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CXCL5P42830 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CXCL5P42830 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
CXCL5P42830 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.48□□□□□ -0.57
CXCL5P42830 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.48□□□□□ -0.57
CXCL5P42830 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.48□□□□□ -0.57
CXCL5P42830 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC11.48□□□□□ -0.57
CXCL5P42830 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
CXCL5P42830 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
CXCL5P42830 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
CXCL5P42830 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC11.48□□□□□ -0.57
CXCL5P42830 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC11.48□□□□□ -0.57
CXCL5P42830 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.48□□□□□ -0.57
CXCL5P42830 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.48□□□□□ -0.57
CXCL5P42830 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.48□□□□□ -0.57
CXCL5P42830 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 ATP5G1P1-201ENST00000448724 379 ntBASIC11.48□□□□□ -0.57
CXCL5P42830 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CXCL5P42830 COX11P1-201ENST00000489116 835 ntBASIC11.48□□□□□ -0.57
CXCL5P42830 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.48□□□□□ -0.57
CXCL5P42830 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC11.48□□□□□ -0.57
CXCL5P42830 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CXCL5P42830 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC11.48□□□□□ -0.57
CXCL5P42830 AL138966.2-201ENST00000621997 464 ntBASIC11.48□□□□□ -0.57
CXCL5P42830 AL023973.1-201ENST00000624619 620 ntBASIC11.48□□□□□ -0.57
CXCL5P42830 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC11.48□□□□□ -0.57
CXCL5P42830 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CXCL5P42830 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.48□□□□□ -0.57
CXCL5P42830 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms