Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
NCAPD3P42695 ELK2AP-201ENST00000392510 1007 ntBASIC29.36■■■□□ 2.29
NCAPD3P42695 CSF2RBP1-201ENST00000447905 391 ntBASIC29.36■■■□□ 2.29
NCAPD3P42695 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
NCAPD3P42695 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC29.36■■■□□ 2.29
NCAPD3P42695 AC025048.3-201ENST00000590609 569 ntBASIC29.36■■■□□ 2.29
NCAPD3P42695 AC005702.4-201ENST00000618393 416 ntBASIC29.36■■■□□ 2.29
NCAPD3P42695 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC29.36■■■□□ 2.29
NCAPD3P42695 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
NCAPD3P42695 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
NCAPD3P42695 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
NCAPD3P42695 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
NCAPD3P42695 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC29.36■■■□□ 2.29
NCAPD3P42695 AC133963.1-201ENST00000504166 1679 ntBASIC29.36■■■□□ 2.29
NCAPD3P42695 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC29.36■■■□□ 2.29
NCAPD3P42695 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC29.36■■■□□ 2.29
NCAPD3P42695 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
NCAPD3P42695 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
NCAPD3P42695 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
NCAPD3P42695 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
NCAPD3P42695 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC29.36■■■□□ 2.29
NCAPD3P42695 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
NCAPD3P42695 PARP8-206ENST00000503665 572 ntTSL 4 BASIC29.36■■■□□ 2.29
NCAPD3P42695 RHOQP1-201ENST00000555758 579 ntBASIC29.36■■■□□ 2.29
NCAPD3P42695 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC29.36■■■□□ 2.29
NCAPD3P42695 EMC4-209ENST00000559421 497 ntTSL 2 BASIC29.36■■■□□ 2.29
NCAPD3P42695 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
NCAPD3P42695 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
NCAPD3P42695 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
NCAPD3P42695 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC29.35■■■□□ 2.29
NCAPD3P42695 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC29.35■■■□□ 2.29
NCAPD3P42695 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
NCAPD3P42695 LBX2-201ENST00000341396 886 ntTSL 3 BASIC29.35■■■□□ 2.29
NCAPD3P42695 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC29.35■■■□□ 2.29
NCAPD3P42695 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
NCAPD3P42695 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
NCAPD3P42695 USB1-202ENST00000423271 1217 ntTSL 2 BASIC29.35■■■□□ 2.29
NCAPD3P42695 KLF2P4-201ENST00000451959 1225 ntBASIC29.35■■■□□ 2.29
NCAPD3P42695 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC29.35■■■□□ 2.29
NCAPD3P42695 AGER-214ENST00000538695 487 ntTSL 2 BASIC29.35■■■□□ 2.29
NCAPD3P42695 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC29.35■■■□□ 2.29
NCAPD3P42695 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
NCAPD3P42695 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC29.35■■■□□ 2.29
NCAPD3P42695 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
NCAPD3P42695 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC29.34■■■□□ 2.29
NCAPD3P42695 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
NCAPD3P42695 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
NCAPD3P42695 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
NCAPD3P42695 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
NCAPD3P42695 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC29.34■■■□□ 2.29
NCAPD3P42695 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC29.34■■■□□ 2.29
NCAPD3P42695 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC29.34■■■□□ 2.29
NCAPD3P42695 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC29.34■■■□□ 2.29
NCAPD3P42695 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC29.34■■■□□ 2.29
NCAPD3P42695 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC29.34■■■□□ 2.29
NCAPD3P42695 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC29.34■■■□□ 2.29
NCAPD3P42695 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
NCAPD3P42695 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC29.33■■■□□ 2.29
NCAPD3P42695 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC29.33■■■□□ 2.29
NCAPD3P42695 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC29.33■■■□□ 2.29
NCAPD3P42695 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
NCAPD3P42695 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
NCAPD3P42695 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
NCAPD3P42695 AC093724.1-201ENST00000448659 1027 ntBASIC29.33■■■□□ 2.29
NCAPD3P42695 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC29.33■■■□□ 2.29
NCAPD3P42695 CLK3P2-201ENST00000427566 1453 ntBASIC29.33■■■□□ 2.29
NCAPD3P42695 PC-204ENST00000524491 1714 ntTSL 2 BASIC29.33■■■□□ 2.29
NCAPD3P42695 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
NCAPD3P42695 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC29.32■■■□□ 2.28
NCAPD3P42695 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC29.32■■■□□ 2.28
NCAPD3P42695 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
NCAPD3P42695 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC29.32■■■□□ 2.28
NCAPD3P42695 AC013467.2-201ENST00000605472 835 ntBASIC29.32■■■□□ 2.28
NCAPD3P42695 MIR6069-201ENST00000620069 79 ntBASIC29.32■■■□□ 2.28
NCAPD3P42695 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
NCAPD3P42695 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC29.32■■■□□ 2.28
NCAPD3P42695 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
NCAPD3P42695 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
NCAPD3P42695 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
NCAPD3P42695 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC29.32■■■□□ 2.28
NCAPD3P42695 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
NCAPD3P42695 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
NCAPD3P42695 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
NCAPD3P42695 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
NCAPD3P42695 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
NCAPD3P42695 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
NCAPD3P42695 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
NCAPD3P42695 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
NCAPD3P42695 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
NCAPD3P42695 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
NCAPD3P42695 VMO1-203ENST00000416307 712 ntTSL 2 BASIC29.31■■■□□ 2.28
NCAPD3P42695 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC29.31■■■□□ 2.28
NCAPD3P42695 ABBA01031660.1-201ENST00000635219 756 ntBASIC29.31■■■□□ 2.28
NCAPD3P42695 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
NCAPD3P42695 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC29.31■■■□□ 2.28
NCAPD3P42695 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
NCAPD3P42695 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
NCAPD3P42695 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
NCAPD3P42695 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
NCAPD3P42695 AC093525.9-201ENST00000624961 1746 ntBASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms