Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 YBX1P5-201ENST00000509441 847 ntBASIC15.53■□□□□ 0.08
RFC3P40938 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
RFC3P40938 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.53■□□□□ 0.08
RFC3P40938 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RFC3P40938 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
RFC3P40938 AL031432.2-201ENST00000566714 459 ntBASIC15.53■□□□□ 0.08
RFC3P40938 AL928711.1-201ENST00000570165 459 ntBASIC15.53■□□□□ 0.08
RFC3P40938 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC3P40938 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC3P40938 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.53■□□□□ 0.08
RFC3P40938 AC091812.2-201ENST00000619081 385 ntBASIC15.53■□□□□ 0.08
RFC3P40938 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC3P40938 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC3P40938 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.53■□□□□ 0.08
RFC3P40938 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC3P40938 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC3P40938 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.53■□□□□ 0.08
RFC3P40938 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC3P40938 ELL2P1-201ENST00000413990 1906 ntBASIC15.53■□□□□ 0.08
RFC3P40938 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.52■□□□□ 0.08
RFC3P40938 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFC3P40938 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFC3P40938 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RFC3P40938 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.52■□□□□ 0.08
RFC3P40938 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RFC3P40938 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFC3P40938 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RFC3P40938 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFC3P40938 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFC3P40938 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFC3P40938 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RFC3P40938 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.52■□□□□ 0.08
RFC3P40938 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.52■□□□□ 0.08
RFC3P40938 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFC3P40938 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFC3P40938 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFC3P40938 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFC3P40938 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.52■□□□□ 0.08
RFC3P40938 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
RFC3P40938 AP006288.1-201ENST00000446065 395 ntBASIC15.52■□□□□ 0.08
RFC3P40938 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.52■□□□□ 0.08
RFC3P40938 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFC3P40938 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.52■□□□□ 0.08
RFC3P40938 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.52■□□□□ 0.08
RFC3P40938 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFC3P40938 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFC3P40938 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.52■□□□□ 0.07
RFC3P40938 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC3P40938 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC3P40938 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.52■□□□□ 0.07
RFC3P40938 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.52■□□□□ 0.07
RFC3P40938 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.52■□□□□ 0.07
RFC3P40938 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC3P40938 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC3P40938 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC3P40938 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC3P40938 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC3P40938 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC3P40938 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
RFC3P40938 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RFC3P40938 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
RFC3P40938 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC3P40938 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RFC3P40938 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.51■□□□□ 0.07
RFC3P40938 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC3P40938 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC3P40938 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.51■□□□□ 0.07
RFC3P40938 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.51■□□□□ 0.07
RFC3P40938 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RFC3P40938 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC3P40938 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.51■□□□□ 0.07
RFC3P40938 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RFC3P40938 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.51■□□□□ 0.07
RFC3P40938 PMS2P2-201ENST00000425039 1128 ntBASIC15.51■□□□□ 0.07
RFC3P40938 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RFC3P40938 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC3P40938 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC3P40938 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.51■□□□□ 0.07
RFC3P40938 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.51■□□□□ 0.07
RFC3P40938 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.51■□□□□ 0.07
RFC3P40938 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RFC3P40938 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RFC3P40938 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
RFC3P40938 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.51■□□□□ 0.07
RFC3P40938 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC3P40938 AL162727.3-201ENST00000635661 2787 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms