Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC092552.1-201ENST00000547243 906 ntBASIC20.03■□□□□ 0.8
COL4A5P29400 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.03■□□□□ 0.8
COL4A5P29400 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL4A5P29400 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL4A5P29400 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL4A5P29400 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
COL4A5P29400 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.02■□□□□ 0.8
COL4A5P29400 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL4A5P29400 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
COL4A5P29400 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL4A5P29400 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.02■□□□□ 0.8
COL4A5P29400 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL4A5P29400 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL4A5P29400 AC087499.6-201ENST00000411576 835 ntBASIC20.02■□□□□ 0.8
COL4A5P29400 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.02■□□□□ 0.8
COL4A5P29400 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL4A5P29400 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.02■□□□□ 0.8
COL4A5P29400 AC008735.3-201ENST00000596646 500 ntBASIC20.02■□□□□ 0.8
COL4A5P29400 AC004461.2-201ENST00000629517 803 ntBASIC20.02■□□□□ 0.8
COL4A5P29400 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL4A5P29400 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.02■□□□□ 0.79
COL4A5P29400 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COL4A5P29400 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.02■□□□□ 0.79
COL4A5P29400 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL4A5P29400 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL4A5P29400 FAM86MP-201ENST00000340703 885 ntBASIC20.01■□□□□ 0.79
COL4A5P29400 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.01■□□□□ 0.79
COL4A5P29400 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.01■□□□□ 0.79
COL4A5P29400 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.01■□□□□ 0.79
COL4A5P29400 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL4A5P29400 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
COL4A5P29400 AC098859.1-201ENST00000502915 1238 ntBASIC20.01■□□□□ 0.79
COL4A5P29400 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.01■□□□□ 0.79
COL4A5P29400 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.01■□□□□ 0.79
COL4A5P29400 MIR4525-201ENST00000580000 75 ntBASIC20.01■□□□□ 0.79
COL4A5P29400 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.01■□□□□ 0.79
COL4A5P29400 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.01■□□□□ 0.79
COL4A5P29400 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.01■□□□□ 0.79
COL4A5P29400 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.01■□□□□ 0.79
COL4A5P29400 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL4A5P29400 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.01■□□□□ 0.79
COL4A5P29400 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL4A5P29400 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
COL4A5P29400 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL4A5P29400 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.01■□□□□ 0.79
COL4A5P29400 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL4A5P29400 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
COL4A5P29400 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20■□□□□ 0.79
COL4A5P29400 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20■□□□□ 0.79
COL4A5P29400 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
COL4A5P29400 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20■□□□□ 0.79
COL4A5P29400 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20■□□□□ 0.79
COL4A5P29400 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20■□□□□ 0.79
COL4A5P29400 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
COL4A5P29400 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20■□□□□ 0.79
COL4A5P29400 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20■□□□□ 0.79
COL4A5P29400 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20■□□□□ 0.79
COL4A5P29400 IMPDH1P4-201ENST00000445028 1534 ntBASIC20■□□□□ 0.79
COL4A5P29400 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COL4A5P29400 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
COL4A5P29400 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20■□□□□ 0.79
COL4A5P29400 AC099568.2-201ENST00000609194 695 ntBASIC20■□□□□ 0.79
COL4A5P29400 MIR6775-201ENST00000617557 69 ntBASIC20■□□□□ 0.79
COL4A5P29400 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20■□□□□ 0.79
COL4A5P29400 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A5P29400 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A5P29400 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.99■□□□□ 0.79
COL4A5P29400 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A5P29400 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A5P29400 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A5P29400 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A5P29400 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A5P29400 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A5P29400 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.99■□□□□ 0.79
COL4A5P29400 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
COL4A5P29400 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A5P29400 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A5P29400 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.99■□□□□ 0.79
COL4A5P29400 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.99■□□□□ 0.79
COL4A5P29400 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC19.99■□□□□ 0.79
COL4A5P29400 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A5P29400 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.99■□□□□ 0.79
COL4A5P29400 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A5P29400 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COL4A5P29400 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms