Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BCKDHBP21953 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BCKDHBP21953 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BCKDHBP21953 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.63■□□□□ 0.25
BCKDHBP21953 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
BCKDHBP21953 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BCKDHBP21953 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BCKDHBP21953 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
BCKDHBP21953 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.63■□□□□ 0.25
BCKDHBP21953 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BCKDHBP21953 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BCKDHBP21953 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
BCKDHBP21953 LINC00896-202ENST00000609602 2128 ntBASIC16.63■□□□□ 0.25
BCKDHBP21953 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.63■□□□□ 0.25
BCKDHBP21953 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.62■□□□□ 0.25
BCKDHBP21953 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 BICD1-207ENST00000551848 1962 ntBASIC16.62■□□□□ 0.25
BCKDHBP21953 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.62■□□□□ 0.25
BCKDHBP21953 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 SLC25A1P3-201ENST00000395415 828 ntBASIC16.62■□□□□ 0.25
BCKDHBP21953 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.62■□□□□ 0.25
BCKDHBP21953 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
BCKDHBP21953 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.62■□□□□ 0.25
BCKDHBP21953 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.62■□□□□ 0.25
BCKDHBP21953 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.62■□□□□ 0.25
BCKDHBP21953 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.62■□□□□ 0.25
BCKDHBP21953 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.62■□□□□ 0.25
BCKDHBP21953 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.62■□□□□ 0.25
BCKDHBP21953 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 CYP2A7P1-201ENST00000595391 815 ntBASIC16.62■□□□□ 0.25
BCKDHBP21953 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
BCKDHBP21953 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.62■□□□□ 0.25
BCKDHBP21953 LINC00895-201ENST00000629028 1637 ntBASIC16.62■□□□□ 0.25
BCKDHBP21953 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
BCKDHBP21953 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.62■□□□□ 0.25
BCKDHBP21953 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.62■□□□□ 0.25
BCKDHBP21953 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.62■□□□□ 0.25
BCKDHBP21953 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
BCKDHBP21953 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BCKDHBP21953 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHBP21953 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHBP21953 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHBP21953 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.61■□□□□ 0.25
BCKDHBP21953 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHBP21953 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHBP21953 FOXO1B-201ENST00000504678 1527 ntBASIC16.61■□□□□ 0.25
BCKDHBP21953 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHBP21953 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHBP21953 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHBP21953 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHBP21953 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
BCKDHBP21953 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHBP21953 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHBP21953 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.61■□□□□ 0.25
BCKDHBP21953 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.61■□□□□ 0.25
BCKDHBP21953 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.61■□□□□ 0.25
BCKDHBP21953 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHBP21953 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.61■□□□□ 0.25
BCKDHBP21953 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.61■□□□□ 0.25
BCKDHBP21953 AC073389.1-201ENST00000595595 795 ntBASIC16.61■□□□□ 0.25
BCKDHBP21953 AL359881.2-201ENST00000602973 570 ntBASIC16.61■□□□□ 0.25
BCKDHBP21953 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHBP21953 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
BCKDHBP21953 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BCKDHBP21953 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BCKDHBP21953 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.61■□□□□ 0.25
BCKDHBP21953 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
BCKDHBP21953 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
BCKDHBP21953 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
BCKDHBP21953 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.61■□□□□ 0.25
BCKDHBP21953 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHBP21953 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHBP21953 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
BCKDHBP21953 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHBP21953 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHBP21953 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHBP21953 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHBP21953 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.6■□□□□ 0.25
BCKDHBP21953 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHBP21953 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
BCKDHBP21953 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BCKDHBP21953 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
BCKDHBP21953 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.6■□□□□ 0.25
BCKDHBP21953 HLA-V-204ENST00000476601 1289 ntBASIC16.6■□□□□ 0.25
BCKDHBP21953 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms