Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 PCDHA14-201ENST00000506751 2298 ntBASIC18.39■□□□□ 0.53
CCDC172P0C7W6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 AC097637.2-201ENST00000624096 1997 ntBASIC18.39■□□□□ 0.53
CCDC172P0C7W6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC172P0C7W6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 PCDHA1-201ENST00000378133 2726 ntBASIC18.38■□□□□ 0.53
CCDC172P0C7W6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.38■□□□□ 0.53
CCDC172P0C7W6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 KRT16P4-201ENST00000453883 522 ntBASIC18.38■□□□□ 0.53
CCDC172P0C7W6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.38■□□□□ 0.53
CCDC172P0C7W6 AC073592.4-201ENST00000623827 446 ntBASIC18.38■□□□□ 0.53
CCDC172P0C7W6 AL358472.4-201ENST00000633140 710 ntBASIC18.38■□□□□ 0.53
CCDC172P0C7W6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 AL021920.2-201ENST00000624828 1351 ntBASIC18.38■□□□□ 0.53
CCDC172P0C7W6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC172P0C7W6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 NUS1P1-201ENST00000446295 882 ntBASIC18.37■□□□□ 0.53
CCDC172P0C7W6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 AL591684.3-201ENST00000605187 298 ntBASIC18.37■□□□□ 0.53
CCDC172P0C7W6 AC010331.1-201ENST00000611423 582 ntBASIC18.37■□□□□ 0.53
CCDC172P0C7W6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 AC148477.5-201ENST00000625164 1645 ntBASIC18.37■□□□□ 0.53
CCDC172P0C7W6 AC079776.2-201ENST00000641154 1609 ntBASIC18.37■□□□□ 0.53
CCDC172P0C7W6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC172P0C7W6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC172P0C7W6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms