Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.78■□□□□ 0.44
RB1P06400 AC138969.3-201ENST00000546612 1459 ntBASIC17.78■□□□□ 0.44
RB1P06400 AC138932.2-201ENST00000548268 1459 ntBASIC17.78■□□□□ 0.44
RB1P06400 AC126755.4-201ENST00000549796 1459 ntBASIC17.78■□□□□ 0.44
RB1P06400 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.78■□□□□ 0.44
RB1P06400 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.78■□□□□ 0.44
RB1P06400 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.78■□□□□ 0.44
RB1P06400 FAM220BP-201ENST00000377689 816 ntBASIC17.78■□□□□ 0.44
RB1P06400 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.78■□□□□ 0.44
RB1P06400 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.78■□□□□ 0.44
RB1P06400 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.78■□□□□ 0.44
RB1P06400 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.78■□□□□ 0.44
RB1P06400 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.78■□□□□ 0.44
RB1P06400 PRYP6-201ENST00000514804 343 ntBASIC17.78■□□□□ 0.44
RB1P06400 API5-211ENST00000534695 560 ntTSL 5 BASIC17.78■□□□□ 0.44
RB1P06400 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 MIR4492-201ENST00000581627 80 ntBASIC17.78■□□□□ 0.44
RB1P06400 AL132655.2-201ENST00000596276 594 ntBASIC17.78■□□□□ 0.44
RB1P06400 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.78■□□□□ 0.44
RB1P06400 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.78■□□□□ 0.44
RB1P06400 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RB1P06400 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
RB1P06400 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RB1P06400 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.77■□□□□ 0.44
RB1P06400 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.77■□□□□ 0.44
RB1P06400 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RB1P06400 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.77■□□□□ 0.44
RB1P06400 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.77■□□□□ 0.44
RB1P06400 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.77■□□□□ 0.44
RB1P06400 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RB1P06400 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RB1P06400 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RB1P06400 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RB1P06400 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RB1P06400 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RB1P06400 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RB1P06400 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RB1P06400 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RB1P06400 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RB1P06400 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.77■□□□□ 0.44
RB1P06400 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.77■□□□□ 0.44
RB1P06400 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.77■□□□□ 0.44
RB1P06400 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RB1P06400 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.77■□□□□ 0.44
RB1P06400 AL589739.1-201ENST00000607720 493 ntBASIC17.77■□□□□ 0.44
RB1P06400 AL844908.2-201ENST00000609461 460 ntBASIC17.77■□□□□ 0.44
RB1P06400 AC008738.7-201ENST00000609744 511 ntBASIC17.77■□□□□ 0.44
RB1P06400 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.77■□□□□ 0.44
RB1P06400 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RB1P06400 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
RB1P06400 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RB1P06400 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.43
RB1P06400 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.77■□□□□ 0.43
RB1P06400 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RB1P06400 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
RB1P06400 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.77■□□□□ 0.43
RB1P06400 AC104581.1-202ENST00000635932 2618 ntBASIC17.77■□□□□ 0.43
RB1P06400 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.77■□□□□ 0.43
RB1P06400 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.77■□□□□ 0.43
RB1P06400 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
RB1P06400 LINC00896-202ENST00000609602 2128 ntBASIC17.77■□□□□ 0.43
RB1P06400 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.76■□□□□ 0.43
RB1P06400 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
RB1P06400 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RB1P06400 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RB1P06400 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RB1P06400 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RB1P06400 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.76■□□□□ 0.43
RB1P06400 SLC25A6P5-201ENST00000435663 894 ntBASIC17.76■□□□□ 0.43
RB1P06400 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.76■□□□□ 0.43
RB1P06400 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 IGHV3-71-201ENST00000523324 359 ntBASIC17.76■□□□□ 0.43
RB1P06400 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 RN7SL828P-201ENST00000607615 303 ntBASIC17.76■□□□□ 0.43
RB1P06400 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RB1P06400 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RB1P06400 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms