Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.89■□□□□ 0.13
PDGFAP04085 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 AC006116.8-202ENST00000587620 1550 ntBASIC15.89■□□□□ 0.13
PDGFAP04085 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.89■□□□□ 0.13
PDGFAP04085 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.89■□□□□ 0.13
PDGFAP04085 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.89■□□□□ 0.13
PDGFAP04085 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.89■□□□□ 0.13
PDGFAP04085 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.89■□□□□ 0.13
PDGFAP04085 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.89■□□□□ 0.13
PDGFAP04085 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.89■□□□□ 0.13
PDGFAP04085 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.89■□□□□ 0.13
PDGFAP04085 AC005498.2-205ENST00000593218 784 ntBASIC15.89■□□□□ 0.13
PDGFAP04085 AC022145.2-201ENST00000598203 171 ntBASIC15.89■□□□□ 0.13
PDGFAP04085 AC068137.2-201ENST00000605408 478 ntBASIC15.89■□□□□ 0.13
PDGFAP04085 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.89■□□□□ 0.13
PDGFAP04085 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.89■□□□□ 0.13
PDGFAP04085 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PDGFAP04085 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.89■□□□□ 0.13
PDGFAP04085 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.89■□□□□ 0.13
PDGFAP04085 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.89■□□□□ 0.13
PDGFAP04085 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 BX276092.7-203ENST00000637198 1536 ntBASIC15.89■□□□□ 0.13
PDGFAP04085 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
PDGFAP04085 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.88■□□□□ 0.13
PDGFAP04085 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
PDGFAP04085 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.88■□□□□ 0.13
PDGFAP04085 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.88■□□□□ 0.13
PDGFAP04085 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.88■□□□□ 0.13
PDGFAP04085 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.88■□□□□ 0.13
PDGFAP04085 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PDGFAP04085 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PDGFAP04085 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.88■□□□□ 0.13
PDGFAP04085 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.88■□□□□ 0.13
PDGFAP04085 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.88■□□□□ 0.13
PDGFAP04085 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.88■□□□□ 0.13
PDGFAP04085 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.88■□□□□ 0.13
PDGFAP04085 REXO1L3P-201ENST00000622202 1288 ntBASIC15.88■□□□□ 0.13
PDGFAP04085 NKILA-202ENST00000614771 2598 ntBASIC15.88■□□□□ 0.13
PDGFAP04085 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 GNAS-203ENST00000306120 1878 ntBASIC15.88■□□□□ 0.13
PDGFAP04085 AL645608.8-201ENST00000606034 2086 ntBASIC15.88■□□□□ 0.13
PDGFAP04085 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.88■□□□□ 0.13
PDGFAP04085 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFAP04085 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.87■□□□□ 0.13
PDGFAP04085 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 AC011676.5-201ENST00000624864 2660 ntBASIC15.87■□□□□ 0.13
PDGFAP04085 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.87■□□□□ 0.13
PDGFAP04085 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PDGFAP04085 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.87■□□□□ 0.13
PDGFAP04085 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.87■□□□□ 0.13
PDGFAP04085 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.87■□□□□ 0.13
PDGFAP04085 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.87■□□□□ 0.13
PDGFAP04085 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.87■□□□□ 0.13
PDGFAP04085 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PDGFAP04085 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.87■□□□□ 0.13
PDGFAP04085 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.87■□□□□ 0.13
PDGFAP04085 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
PDGFAP04085 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms