Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 VN2R19P-201ENST00000442399 1052 ntBASIC13.1□□□□□ -0.31
TRBV12-3P01733 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 AC107918.2-201ENST00000530817 355 ntBASIC13.1□□□□□ -0.31
TRBV12-3P01733 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 AC010654.1-201ENST00000615722 808 ntBASIC13.1□□□□□ -0.31
TRBV12-3P01733 REXO1L3P-201ENST00000622202 1288 ntBASIC13.1□□□□□ -0.31
TRBV12-3P01733 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.1□□□□□ -0.31
TRBV12-3P01733 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV12-3P01733 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 MIR940-201ENST00000401276 94 ntBASIC13.09□□□□□ -0.31
TRBV12-3P01733 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 IGLL3P-201ENST00000412472 434 ntBASIC13.09□□□□□ -0.31
TRBV12-3P01733 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 AC106730.1-201ENST00000566722 1090 ntBASIC13.09□□□□□ -0.31
TRBV12-3P01733 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 AL121761.2-201ENST00000598007 1648 ntBASIC13.09□□□□□ -0.31
TRBV12-3P01733 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.09□□□□□ -0.31
TRBV12-3P01733 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV12-3P01733 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TRBV12-3P01733 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
TRBV12-3P01733 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
TRBV12-3P01733 ZNF259P1-201ENST00000407656 1365 ntBASIC13.08□□□□□ -0.31
TRBV12-3P01733 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV12-3P01733 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV12-3P01733 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV12-3P01733 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRBV12-3P01733 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.08□□□□□ -0.32
TRBV12-3P01733 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV12-3P01733 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.08□□□□□ -0.32
TRBV12-3P01733 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV12-3P01733 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV12-3P01733 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV12-3P01733 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV12-3P01733 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.08□□□□□ -0.32
TRBV12-3P01733 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.08□□□□□ -0.32
TRBV12-3P01733 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV12-3P01733 CRYGEP-201ENST00000412192 528 ntBASIC13.08□□□□□ -0.32
TRBV12-3P01733 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
TRBV12-3P01733 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV12-3P01733 PRSS29P-201ENST00000440800 595 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms