Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC25■■□□□ 1.59
RAPGEF3O95398 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC25■■□□□ 1.59
RAPGEF3O95398 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC25■■□□□ 1.59
RAPGEF3O95398 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC25■■□□□ 1.59
RAPGEF3O95398 AC108725.1-201ENST00000495472 409 ntBASIC25■■□□□ 1.59
RAPGEF3O95398 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC25■■□□□ 1.59
RAPGEF3O95398 AC103810.3-201ENST00000583567 96 ntBASIC25■■□□□ 1.59
RAPGEF3O95398 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC25■■□□□ 1.59
RAPGEF3O95398 TUBB1P2-201ENST00000422712 1306 ntBASIC25■■□□□ 1.59
RAPGEF3O95398 TUBB1P1-201ENST00000503144 1300 ntBASIC25■■□□□ 1.59
RAPGEF3O95398 AC018665.1-201ENST00000622927 1362 ntBASIC25■■□□□ 1.59
RAPGEF3O95398 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
RAPGEF3O95398 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC25■■□□□ 1.59
RAPGEF3O95398 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC25■■□□□ 1.59
RAPGEF3O95398 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC25■■□□□ 1.59
RAPGEF3O95398 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC25■■□□□ 1.59
RAPGEF3O95398 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
RAPGEF3O95398 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
RAPGEF3O95398 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC24.99■■□□□ 1.59
RAPGEF3O95398 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC24.99■■□□□ 1.59
RAPGEF3O95398 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC24.99■■□□□ 1.59
RAPGEF3O95398 GOLGA2P4-201ENST00000441462 777 ntBASIC24.99■■□□□ 1.59
RAPGEF3O95398 AL355994.2-201ENST00000447882 704 ntBASIC24.99■■□□□ 1.59
RAPGEF3O95398 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 SERBP1P3-201ENST00000459980 809 ntBASIC24.99■■□□□ 1.59
RAPGEF3O95398 KRT8P12-202ENST00000472924 1397 ntBASIC24.99■■□□□ 1.59
RAPGEF3O95398 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC24.99■■□□□ 1.59
RAPGEF3O95398 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC24.99■■□□□ 1.59
RAPGEF3O95398 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC24.99■■□□□ 1.59
RAPGEF3O95398 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RAPGEF3O95398 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 NOC2LP1-202ENST00000452600 2235 ntBASIC24.98■■□□□ 1.59
RAPGEF3O95398 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RAPGEF3O95398 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 AC138028.4-201ENST00000564984 1845 ntBASIC24.98■■□□□ 1.59
RAPGEF3O95398 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RAPGEF3O95398 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
RAPGEF3O95398 IMPDH1P4-201ENST00000445028 1534 ntBASIC24.98■■□□□ 1.59
RAPGEF3O95398 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RAPGEF3O95398 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RAPGEF3O95398 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RAPGEF3O95398 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RAPGEF3O95398 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RAPGEF3O95398 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RAPGEF3O95398 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RAPGEF3O95398 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RAPGEF3O95398 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 AL139099.5-201ENST00000635274 300 ntBASIC24.98■■□□□ 1.59
RAPGEF3O95398 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RAPGEF3O95398 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RAPGEF3O95398 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RAPGEF3O95398 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RAPGEF3O95398 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RAPGEF3O95398 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RAPGEF3O95398 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
RAPGEF3O95398 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC24.97■■□□□ 1.59
RAPGEF3O95398 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
RAPGEF3O95398 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC24.97■■□□□ 1.59
RAPGEF3O95398 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC24.97■■□□□ 1.59
RAPGEF3O95398 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC24.97■■□□□ 1.59
RAPGEF3O95398 QPRT-203ENST00000562473 579 ntTSL 3 BASIC24.97■■□□□ 1.59
RAPGEF3O95398 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC24.97■■□□□ 1.59
RAPGEF3O95398 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
RAPGEF3O95398 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC24.97■■□□□ 1.59
RAPGEF3O95398 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RAPGEF3O95398 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
RAPGEF3O95398 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RAPGEF3O95398 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RAPGEF3O95398 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RAPGEF3O95398 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms