Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH8O95206 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH8O95206 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH8O95206 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH8O95206 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH8O95206 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDH8O95206 AP000344.2-201ENST00000512987 629 ntBASIC16.9■□□□□ 0.3
PCDH8O95206 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.9■□□□□ 0.3
PCDH8O95206 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDH8O95206 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH8O95206 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH8O95206 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH8O95206 AL353732.1-201ENST00000569618 1459 ntBASIC16.9■□□□□ 0.3
PCDH8O95206 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH8O95206 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH8O95206 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH8O95206 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH8O95206 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH8O95206 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH8O95206 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDH8O95206 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH8O95206 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PCDH8O95206 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDH8O95206 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDH8O95206 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCDH8O95206 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCDH8O95206 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDH8O95206 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
PCDH8O95206 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDH8O95206 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDH8O95206 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
PCDH8O95206 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 HMGA1P7-201ENST00000406908 502 ntBASIC16.89■□□□□ 0.29
PCDH8O95206 AL671277.1-201ENST00000429656 993 ntBASIC16.89■□□□□ 0.29
PCDH8O95206 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDH8O95206 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH8O95206 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCDH8O95206 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH8O95206 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDH8O95206 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDH8O95206 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDH8O95206 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCDH8O95206 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDH8O95206 TOP3BP1-201ENST00000420768 1380 ntBASIC16.89■□□□□ 0.29
PCDH8O95206 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDH8O95206 AL021920.2-201ENST00000624828 1351 ntBASIC16.89■□□□□ 0.29
PCDH8O95206 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDH8O95206 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCDH8O95206 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDH8O95206 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PCDH8O95206 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PCDH8O95206 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH8O95206 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PCDH8O95206 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
PCDH8O95206 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH8O95206 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 FRMD8P1-201ENST00000440433 1524 ntBASIC16.88■□□□□ 0.29
PCDH8O95206 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 TIMM8BP1-201ENST00000452384 211 ntBASIC16.88■□□□□ 0.29
PCDH8O95206 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDH8O95206 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH8O95206 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDH8O95206 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDH8O95206 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDH8O95206 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.88■□□□□ 0.29
PCDH8O95206 AC027796.2-201ENST00000575326 344 ntBASIC16.88■□□□□ 0.29
PCDH8O95206 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDH8O95206 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDH8O95206 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDH8O95206 AC004835.2-201ENST00000603762 682 ntBASIC16.88■□□□□ 0.29
PCDH8O95206 AC105339.1-204ENST00000636249 355 ntBASIC16.88■□□□□ 0.29
PCDH8O95206 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDH8O95206 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDH8O95206 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDH8O95206 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms