Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.29■□□□□ 0.04
PTP4A3O75365 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.29■□□□□ 0.04
PTP4A3O75365 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PTP4A3O75365 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PTP4A3O75365 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A3O75365 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PTP4A3O75365 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A3O75365 ME2P1-201ENST00000426028 1970 ntBASIC15.28■□□□□ 0.04
PTP4A3O75365 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
PTP4A3O75365 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.28■□□□□ 0.04
PTP4A3O75365 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 BX005266.1-201ENST00000473402 457 ntBASIC15.28■□□□□ 0.04
PTP4A3O75365 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PTP4A3O75365 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A3O75365 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.28■□□□□ 0.04
PTP4A3O75365 NKAPP1-205ENST00000585790 367 ntBASIC15.28■□□□□ 0.04
PTP4A3O75365 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
PTP4A3O75365 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PTP4A3O75365 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A3O75365 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.28■□□□□ 0.04
PTP4A3O75365 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A3O75365 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A3O75365 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A3O75365 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.28■□□□□ 0.04
PTP4A3O75365 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.28■□□□□ 0.04
PTP4A3O75365 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PTP4A3O75365 AC092364.2-201ENST00000596710 2692 ntBASIC15.28■□□□□ 0.04
PTP4A3O75365 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTP4A3O75365 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A3O75365 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A3O75365 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A3O75365 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A3O75365 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A3O75365 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A3O75365 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A3O75365 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A3O75365 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.27■□□□□ 0.04
PTP4A3O75365 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A3O75365 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.27■□□□□ 0.04
PTP4A3O75365 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTP4A3O75365 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.27■□□□□ 0.04
PTP4A3O75365 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.27■□□□□ 0.04
PTP4A3O75365 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.27■□□□□ 0.04
PTP4A3O75365 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.27■□□□□ 0.04
PTP4A3O75365 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.27■□□□□ 0.04
PTP4A3O75365 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.27■□□□□ 0.04
PTP4A3O75365 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PTP4A3O75365 AL022326.1-202ENST00000641533 845 ntBASIC15.27■□□□□ 0.04
PTP4A3O75365 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTP4A3O75365 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.27■□□□□ 0.03
PTP4A3O75365 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
PTP4A3O75365 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.27■□□□□ 0.03
PTP4A3O75365 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PTP4A3O75365 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTP4A3O75365 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PTP4A3O75365 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PTP4A3O75365 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.26■□□□□ 0.03
PTP4A3O75365 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.26■□□□□ 0.03
PTP4A3O75365 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 NCF1C-201ENST00000438382 1427 ntBASIC15.26■□□□□ 0.03
PTP4A3O75365 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.26■□□□□ 0.03
PTP4A3O75365 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 AL513523.2-202ENST00000427283 2040 ntBASIC15.26■□□□□ 0.03
PTP4A3O75365 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms