Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.06■□□□□ 0
SGCEO43556 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SGCEO43556 PCDH8P1-201ENST00000428983 2773 ntBASIC15.06■□□□□ 0
SGCEO43556 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.06■□□□□ 0
SGCEO43556 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SGCEO43556 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SGCEO43556 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SGCEO43556 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
SGCEO43556 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SGCEO43556 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SGCEO43556 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
SGCEO43556 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.05■□□□□ 0
SGCEO43556 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SGCEO43556 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SGCEO43556 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
SGCEO43556 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SGCEO43556 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.05■□□□□ 0
SGCEO43556 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.05■□□□□ 0
SGCEO43556 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.05■□□□□ 0
SGCEO43556 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 PRYP5-201ENST00000451909 266 ntBASIC15.05■□□□□ -0
SGCEO43556 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.05■□□□□ -0
SGCEO43556 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.05■□□□□ -0
SGCEO43556 NKAPP1-205ENST00000585790 367 ntBASIC15.05■□□□□ -0
SGCEO43556 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.05■□□□□ -0
SGCEO43556 AC008608.2-201ENST00000606089 416 ntBASIC15.05■□□□□ -0
SGCEO43556 REXO1L6P-202ENST00000619970 1078 ntBASIC15.05■□□□□ -0
SGCEO43556 AL355877.3-201ENST00000622820 899 ntBASIC15.05■□□□□ -0
SGCEO43556 AC012313.10-201ENST00000623509 926 ntBASIC15.05■□□□□ -0
SGCEO43556 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SGCEO43556 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.05■□□□□ -0
SGCEO43556 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.05■□□□□ -0
SGCEO43556 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SGCEO43556 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.05■□□□□ -0
SGCEO43556 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.05■□□□□ -0
SGCEO43556 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SGCEO43556 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SGCEO43556 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.04■□□□□ -0
SGCEO43556 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
SGCEO43556 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.04■□□□□ -0
SGCEO43556 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SGCEO43556 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.04■□□□□ -0
SGCEO43556 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.04■□□□□ -0
SGCEO43556 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.04■□□□□ -0
SGCEO43556 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.04■□□□□ -0
SGCEO43556 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.04■□□□□ -0
SGCEO43556 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.04■□□□□ -0
SGCEO43556 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 LINC00982-205ENST00000420957 435 ntBASIC15.04■□□□□ -0
SGCEO43556 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SGCEO43556 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.04■□□□□ -0
SGCEO43556 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.04■□□□□ -0
SGCEO43556 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.04■□□□□ -0
SGCEO43556 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SGCEO43556 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.04■□□□□ -0
SGCEO43556 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SGCEO43556 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.04■□□□□ -0
SGCEO43556 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.04■□□□□ -0
SGCEO43556 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.04■□□□□ -0
SGCEO43556 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.04■□□□□ -0
SGCEO43556 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SGCEO43556 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.04■□□□□ -0
SGCEO43556 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SGCEO43556 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SGCEO43556 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms