Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
FOXN1O15353 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXN1O15353 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXN1O15353 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXN1O15353 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 SPDYE7P-202ENST00000420373 878 ntBASIC20.19■□□□□ 0.82
FOXN1O15353 AC112492.5-201ENST00000421897 457 ntBASIC20.19■□□□□ 0.82
FOXN1O15353 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXN1O15353 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.19■□□□□ 0.82
FOXN1O15353 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
FOXN1O15353 AC092552.1-201ENST00000547243 906 ntBASIC20.19■□□□□ 0.82
FOXN1O15353 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
FOXN1O15353 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXN1O15353 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXN1O15353 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXN1O15353 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXN1O15353 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXN1O15353 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN1O15353 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXN1O15353 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXN1O15353 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN1O15353 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
FOXN1O15353 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
FOXN1O15353 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXN1O15353 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXN1O15353 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN1O15353 FAM86MP-201ENST00000340703 885 ntBASIC20.18■□□□□ 0.82
FOXN1O15353 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN1O15353 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXN1O15353 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.18■□□□□ 0.82
FOXN1O15353 AC103564.2-201ENST00000432853 1299 ntBASIC20.18■□□□□ 0.82
FOXN1O15353 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
FOXN1O15353 SPDYE14P-201ENST00000442619 822 ntBASIC20.18■□□□□ 0.82
FOXN1O15353 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXN1O15353 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXN1O15353 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.18■□□□□ 0.82
FOXN1O15353 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN1O15353 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXN1O15353 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN1O15353 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN1O15353 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN1O15353 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXN1O15353 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN1O15353 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN1O15353 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN1O15353 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXN1O15353 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN1O15353 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN1O15353 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXN1O15353 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXN1O15353 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN1O15353 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN1O15353 REXO1L6P-201ENST00000603433 1515 ntBASIC20.17■□□□□ 0.82
FOXN1O15353 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN1O15353 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXN1O15353 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXN1O15353 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN1O15353 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN1O15353 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN1O15353 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXN1O15353 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN1O15353 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXN1O15353 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN1O15353 RN7SL589P-201ENST00000481268 310 ntBASIC20.17■□□□□ 0.82
FOXN1O15353 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXN1O15353 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXN1O15353 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.17■□□□□ 0.82
FOXN1O15353 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN1O15353 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN1O15353 AC132938.5-201ENST00000624980 1813 ntBASIC20.17■□□□□ 0.82
FOXN1O15353 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
FOXN1O15353 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXN1O15353 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXN1O15353 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
FOXN1O15353 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN1O15353 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN1O15353 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
FOXN1O15353 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN1O15353 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXN1O15353 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXN1O15353 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXN1O15353 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN1O15353 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
FOXN1O15353 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXN1O15353 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms