Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC26.88■■□□□ 1.89
CHD1O14646 ACTG1P17-201ENST00000558391 1119 ntBASIC26.88■■□□□ 1.89
CHD1O14646 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHD1O14646 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC26.88■■□□□ 1.89
CHD1O14646 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC26.88■■□□□ 1.89
CHD1O14646 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC26.88■■□□□ 1.89
CHD1O14646 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHD1O14646 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CHD1O14646 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC26.88■■□□□ 1.89
CHD1O14646 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC26.88■■□□□ 1.89
CHD1O14646 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC26.88■■□□□ 1.89
CHD1O14646 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC26.88■■□□□ 1.89
CHD1O14646 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CHD1O14646 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CHD1O14646 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
CHD1O14646 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC26.87■■□□□ 1.89
CHD1O14646 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CHD1O14646 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC26.87■■□□□ 1.89
CHD1O14646 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC26.87■■□□□ 1.89
CHD1O14646 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC26.87■■□□□ 1.89
CHD1O14646 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CHD1O14646 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHD1O14646 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC26.87■■□□□ 1.89
CHD1O14646 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC26.87■■□□□ 1.89
CHD1O14646 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC26.87■■□□□ 1.89
CHD1O14646 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC26.87■■□□□ 1.89
CHD1O14646 AC025048.3-201ENST00000590609 569 ntBASIC26.87■■□□□ 1.89
CHD1O14646 AC005702.4-201ENST00000618393 416 ntBASIC26.87■■□□□ 1.89
CHD1O14646 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
CHD1O14646 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CHD1O14646 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHD1O14646 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC26.87■■□□□ 1.89
CHD1O14646 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHD1O14646 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHD1O14646 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CHD1O14646 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHD1O14646 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHD1O14646 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHD1O14646 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC26.87■■□□□ 1.89
CHD1O14646 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC26.87■■□□□ 1.89
CHD1O14646 AL158212.4-201ENST00000624062 1286 ntBASIC26.87■■□□□ 1.89
CHD1O14646 AC015967.2-201ENST00000624092 234 ntBASIC26.87■■□□□ 1.89
CHD1O14646 AC006435.4-201ENST00000625037 234 ntBASIC26.87■■□□□ 1.89
CHD1O14646 AL356737.1-201ENST00000634391 234 ntBASIC26.87■■□□□ 1.89
CHD1O14646 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC26.87■■□□□ 1.89
CHD1O14646 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC26.87■■□□□ 1.89
CHD1O14646 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHD1O14646 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHD1O14646 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHD1O14646 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHD1O14646 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC26.86■■□□□ 1.89
CHD1O14646 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC26.86■■□□□ 1.89
CHD1O14646 KRT8P13-201ENST00000463294 1010 ntBASIC26.86■■□□□ 1.89
CHD1O14646 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC26.86■■□□□ 1.89
CHD1O14646 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC26.86■■□□□ 1.89
CHD1O14646 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHD1O14646 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC26.86■■□□□ 1.89
CHD1O14646 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CHD1O14646 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CHD1O14646 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CHD1O14646 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CHD1O14646 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHD1O14646 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHD1O14646 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CHD1O14646 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
CHD1O14646 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CHD1O14646 AL442647.2-201ENST00000429864 857 ntBASIC26.85■■□□□ 1.89
CHD1O14646 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC26.85■■□□□ 1.89
CHD1O14646 AC016629.1-201ENST00000596579 586 ntBASIC26.85■■□□□ 1.89
CHD1O14646 AC010328.2-201ENST00000597698 1111 ntBASIC26.85■■□□□ 1.89
CHD1O14646 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHD1O14646 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHD1O14646 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHD1O14646 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHD1O14646 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHD1O14646 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC26.85■■□□□ 1.89
CHD1O14646 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
CHD1O14646 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC26.85■■□□□ 1.89
CHD1O14646 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CHD1O14646 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CHD1O14646 WDR53-204ENST00000433160 887 ntTSL 5 BASIC26.85■■□□□ 1.89
CHD1O14646 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHD1O14646 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC26.85■■□□□ 1.89
CHD1O14646 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CHD1O14646 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC26.85■■□□□ 1.89
CHD1O14646 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CHD1O14646 GNRHR2-203ENST00000581100 1187 ntBASIC26.85■■□□□ 1.89
CHD1O14646 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC26.85■■□□□ 1.89
CHD1O14646 TP73-213ENST00000604479 1623 ntTSL 5 BASIC26.85■■□□□ 1.89
CHD1O14646 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC26.85■■□□□ 1.89
CHD1O14646 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CHD1O14646 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHD1O14646 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CHD1O14646 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHD1O14646 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHD1O14646 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CHD1O14646 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CHD1O14646 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHD1O14646 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CHD1O14646 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms