Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC162PA2VCL2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 AC073621.1-201ENST00000392730 636 ntBASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 KRT18P67-201ENST00000432816 1264 ntBASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 AL805961.1-202ENST00000641562 540 ntBASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 AL021920.2-201ENST00000624828 1351 ntBASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC162PA2VCL2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 AL645728.1-201ENST00000366221 2101 ntBASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 PI4KAP1-204ENST00000612579 1703 ntBASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 AF186996.4-201ENST00000467186 377 ntBASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 AC012640.2-201ENST00000561606 901 ntBASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 AC104692.2-201ENST00000603054 253 ntBASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 AC008735.5-201ENST00000623544 497 ntBASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC162PA2VCL2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC162PA2VCL2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC162PA2VCL2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC162PA2VCL2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC162PA2VCL2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC162PA2VCL2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC162PA2VCL2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms