Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 RN7SL589P-201ENST00000481268 310 ntBASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 AC093520.2-201ENST00000561830 333 ntBASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 AC106820.2-201ENST00000563775 3264 ntBASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 AC006277.1-201ENST00000624348 1610 ntBASIC18.09■□□□□ 0.49
SMIM28A0A1B0GU29 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM28A0A1B0GU29 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM28A0A1B0GU29 AC060834.1-201ENST00000443027 2032 ntBASIC18.08■□□□□ 0.49
SMIM28A0A1B0GU29 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM28A0A1B0GU29 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM28A0A1B0GU29 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM28A0A1B0GU29 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM28A0A1B0GU29 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM28A0A1B0GU29 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM28A0A1B0GU29 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 AC090340.1-201ENST00000620778 4980 ntBASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 AC027796.2-201ENST00000575326 344 ntBASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 AC013467.2-201ENST00000605472 835 ntBASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.08■□□□□ 0.48
SMIM28A0A1B0GU29 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 WASH6P-202ENST00000359512 1437 ntBASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 TSEN15P1-201ENST00000423257 515 ntBASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 AL592309.1-201ENST00000443127 649 ntBASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM28A0A1B0GU29 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM28A0A1B0GU29 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SMIM28A0A1B0GU29 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SMIM28A0A1B0GU29 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SMIM28A0A1B0GU29 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM28A0A1B0GU29 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.06■□□□□ 0.48
SMIM28A0A1B0GU29 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM28A0A1B0GU29 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
SMIM28A0A1B0GU29 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM28A0A1B0GU29 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM28A0A1B0GU29 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms