Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 AL596275.1-201ENST00000423464 877 ntBASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 AL137013.1-201ENST00000432946 1228 ntBASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 STK19B-204ENST00000512515 211 ntBASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 GUSBP12-201ENST00000513727 720 ntBASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 HYMAI.1-201ENST00000620949 238 ntBASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 AL513477.1-201ENST00000602865 2407 ntBASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 AC022188.1-201ENST00000620960 1664 ntBASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 AC124864.1-201ENST00000623408 392 ntBASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 AC009336.1-201ENST00000608941 1553 ntBASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV5A0A0B4J249 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 FAM220CP-201ENST00000395253 831 ntBASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 TSPY5P-201ENST00000426936 936 ntBASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 AC005336.2-201ENST00000593183 939 ntBASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 AL138831.2-201ENST00000606564 490 ntBASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV5A0A0B4J249 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms