Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NCDNQ9UBB6 ZNRF2P3-201ENST00000424200 374 ntBASIC24.08■■□□□ 1.45
NCDNQ9UBB6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.08■■□□□ 1.45
NCDNQ9UBB6 AL356740.2-201ENST00000601559 647 ntBASIC24.08■■□□□ 1.45
NCDNQ9UBB6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NCDNQ9UBB6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
NCDNQ9UBB6 ABCB10P3-201ENST00000561950 2166 ntBASIC24.08■■□□□ 1.44
NCDNQ9UBB6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NCDNQ9UBB6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
NCDNQ9UBB6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.07■■□□□ 1.44
NCDNQ9UBB6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.07■■□□□ 1.44
NCDNQ9UBB6 MIR3621-201ENST00000580529 85 ntBASIC24.07■■□□□ 1.44
NCDNQ9UBB6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NCDNQ9UBB6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
NCDNQ9UBB6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
NCDNQ9UBB6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NCDNQ9UBB6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.06■■□□□ 1.44
NCDNQ9UBB6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
NCDNQ9UBB6 AC010997.5-201ENST00000609182 354 ntBASIC24.06■■□□□ 1.44
NCDNQ9UBB6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
NCDNQ9UBB6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NCDNQ9UBB6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NCDNQ9UBB6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NCDNQ9UBB6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NCDNQ9UBB6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.05■■□□□ 1.44
NCDNQ9UBB6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.05■■□□□ 1.44
NCDNQ9UBB6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NCDNQ9UBB6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NCDNQ9UBB6 KRT18P10-201ENST00000388836 1287 ntBASIC24.04■■□□□ 1.44
NCDNQ9UBB6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.04■■□□□ 1.44
NCDNQ9UBB6 MIR5787-201ENST00000611784 55 ntBASIC24.04■■□□□ 1.44
NCDNQ9UBB6 MIR6724-1-201ENST00000616420 92 ntBASIC24.04■■□□□ 1.44
NCDNQ9UBB6 MIR6724-2-201ENST00000616483 92 ntBASIC24.04■■□□□ 1.44
NCDNQ9UBB6 MIR6724-4-201ENST00000617390 92 ntBASIC24.04■■□□□ 1.44
NCDNQ9UBB6 MIR6724-3-201ENST00000622482 92 ntBASIC24.04■■□□□ 1.44
NCDNQ9UBB6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
NCDNQ9UBB6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
NCDNQ9UBB6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
NCDNQ9UBB6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NCDNQ9UBB6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
NCDNQ9UBB6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NCDNQ9UBB6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NCDNQ9UBB6 AC120024.1-201ENST00000562672 995 ntBASIC24.03■■□□□ 1.44
NCDNQ9UBB6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NCDNQ9UBB6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
NCDNQ9UBB6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
NCDNQ9UBB6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NCDNQ9UBB6 MTDHP2-201ENST00000601468 714 ntBASIC24.02■■□□□ 1.44
NCDNQ9UBB6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
NCDNQ9UBB6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.02■■□□□ 1.44
NCDNQ9UBB6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.02■■□□□ 1.44
NCDNQ9UBB6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
NCDNQ9UBB6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NCDNQ9UBB6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NCDNQ9UBB6 AC142381.2-201ENST00000566120 298 ntBASIC24.01■■□□□ 1.43
NCDNQ9UBB6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.01■■□□□ 1.43
NCDNQ9UBB6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.01■■□□□ 1.43
NCDNQ9UBB6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.01■■□□□ 1.43
NCDNQ9UBB6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
NCDNQ9UBB6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NCDNQ9UBB6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.01■■□□□ 1.43
NCDNQ9UBB6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NCDNQ9UBB6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24■■□□□ 1.43
NCDNQ9UBB6 MIR4466-201ENST00000606121 54 ntBASIC24■■□□□ 1.43
NCDNQ9UBB6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24■■□□□ 1.43
NCDNQ9UBB6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24■■□□□ 1.43
NCDNQ9UBB6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
NCDNQ9UBB6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
NCDNQ9UBB6 AC026271.2-201ENST00000428091 497 ntBASIC23.99■■□□□ 1.43
NCDNQ9UBB6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.99■■□□□ 1.43
NCDNQ9UBB6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NCDNQ9UBB6 WHAMMP3-201ENST00000611636 1609 ntBASIC23.99■■□□□ 1.43
NCDNQ9UBB6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NCDNQ9UBB6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NCDNQ9UBB6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.98■■□□□ 1.43
NCDNQ9UBB6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.98■■□□□ 1.43
NCDNQ9UBB6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
NCDNQ9UBB6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NCDNQ9UBB6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NCDNQ9UBB6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
NCDNQ9UBB6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
NCDNQ9UBB6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
NCDNQ9UBB6 AC135279.3-201ENST00000610945 1311 ntBASIC23.95■■□□□ 1.42
NCDNQ9UBB6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NCDNQ9UBB6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
NCDNQ9UBB6 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.95■■□□□ 1.42
NCDNQ9UBB6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.95■■□□□ 1.42
NCDNQ9UBB6 PBX2P1-201ENST00000493219 1291 ntBASIC23.95■■□□□ 1.42
NCDNQ9UBB6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
NCDNQ9UBB6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.94■■□□□ 1.42
NCDNQ9UBB6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCDNQ9UBB6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NCDNQ9UBB6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCDNQ9UBB6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NCDNQ9UBB6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.94■■□□□ 1.42
NCDNQ9UBB6 AP002414.2-202ENST00000590929 1450 ntBASIC23.94■■□□□ 1.42
NCDNQ9UBB6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.93■■□□□ 1.42
NCDNQ9UBB6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NCDNQ9UBB6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
NCDNQ9UBB6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms