Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 DUX4L23-201ENST00000615195 1269 ntBASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 DUX4L24-201ENST00000617576 1269 ntBASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 DUX4L22-201ENST00000618238 1269 ntBASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 DUX4L20-201ENST00000619712 1269 ntBASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 DUX4L21-201ENST00000622058 1269 ntBASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 DUX4L10-201ENST00000622460 1267 ntBASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 DUX4L25-201ENST00000624915 1269 ntBASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.05■□□□□ 0.96
RBFOX1Q9NWB1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RBFOX1Q9NWB1 DUX4L11-201ENST00000611504 1267 ntBASIC21.04■□□□□ 0.96
RBFOX1Q9NWB1 DUX4L12-201ENST00000614593 1267 ntBASIC21.04■□□□□ 0.96
RBFOX1Q9NWB1 DUX4L14-201ENST00000621227 1267 ntBASIC21.04■□□□□ 0.96
RBFOX1Q9NWB1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RBFOX1Q9NWB1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.04■□□□□ 0.96
RBFOX1Q9NWB1 CLDN5-201ENST00000403084 2357 ntBASIC21.04■□□□□ 0.96
RBFOX1Q9NWB1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBFOX1Q9NWB1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RBFOX1Q9NWB1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.03■□□□□ 0.96
RBFOX1Q9NWB1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBFOX1Q9NWB1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.03■□□□□ 0.96
RBFOX1Q9NWB1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.03■□□□□ 0.96
RBFOX1Q9NWB1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.03■□□□□ 0.96
RBFOX1Q9NWB1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBFOX1Q9NWB1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RBFOX1Q9NWB1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RBFOX1Q9NWB1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RBFOX1Q9NWB1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.02■□□□□ 0.96
RBFOX1Q9NWB1 ZNRF2P2-203ENST00000454624 420 ntBASIC21.02■□□□□ 0.96
RBFOX1Q9NWB1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RBFOX1Q9NWB1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
RBFOX1Q9NWB1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBFOX1Q9NWB1 WHAMMP3-201ENST00000611636 1609 ntBASIC21.01■□□□□ 0.95
RBFOX1Q9NWB1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RBFOX1Q9NWB1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RBFOX1Q9NWB1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RBFOX1Q9NWB1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RBFOX1Q9NWB1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RBFOX1Q9NWB1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RBFOX1Q9NWB1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RBFOX1Q9NWB1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21■□□□□ 0.95
RBFOX1Q9NWB1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RBFOX1Q9NWB1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RBFOX1Q9NWB1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RBFOX1Q9NWB1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RBFOX1Q9NWB1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RBFOX1Q9NWB1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.99■□□□□ 0.95
RBFOX1Q9NWB1 AC010501.1-201ENST00000606270 1962 ntBASIC20.99■□□□□ 0.95
RBFOX1Q9NWB1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RBFOX1Q9NWB1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RBFOX1Q9NWB1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RBFOX1Q9NWB1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RBFOX1Q9NWB1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBFOX1Q9NWB1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBFOX1Q9NWB1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBFOX1Q9NWB1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RBFOX1Q9NWB1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RBFOX1Q9NWB1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBFOX1Q9NWB1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RBFOX1Q9NWB1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RBFOX1Q9NWB1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RBFOX1Q9NWB1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBFOX1Q9NWB1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBFOX1Q9NWB1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBFOX1Q9NWB1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBFOX1Q9NWB1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RBFOX1Q9NWB1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RBFOX1Q9NWB1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RBFOX1Q9NWB1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBFOX1Q9NWB1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RBFOX1Q9NWB1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RBFOX1Q9NWB1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RBFOX1Q9NWB1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBFOX1Q9NWB1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RBFOX1Q9NWB1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RBFOX1Q9NWB1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RBFOX1Q9NWB1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
RBFOX1Q9NWB1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBFOX1Q9NWB1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBFOX1Q9NWB1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.94■□□□□ 0.94
RBFOX1Q9NWB1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RBFOX1Q9NWB1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RBFOX1Q9NWB1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RBFOX1Q9NWB1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.93■□□□□ 0.94
RBFOX1Q9NWB1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBFOX1Q9NWB1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBFOX1Q9NWB1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RBFOX1Q9NWB1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBFOX1Q9NWB1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBFOX1Q9NWB1 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.93■□□□□ 0.94
RBFOX1Q9NWB1 ABHD17AP4-201ENST00000411545 909 ntBASIC20.93■□□□□ 0.94
RBFOX1Q9NWB1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBFOX1Q9NWB1 AC008813.1-201ENST00000536597 885 ntBASIC20.93■□□□□ 0.94
RBFOX1Q9NWB1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RBFOX1Q9NWB1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.93■□□□□ 0.94
RBFOX1Q9NWB1 AC142472.1-201ENST00000612013 1741 ntBASIC20.92■□□□□ 0.94
RBFOX1Q9NWB1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RBFOX1Q9NWB1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms