Protein–RNA interactions for Protein: Q9H0X6

RNF208, RING finger protein 208, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF208Q9H0X6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RNF208Q9H0X6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.31■■□□□ 1.96
RNF208Q9H0X6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF208Q9H0X6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF208Q9H0X6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC27.31■■□□□ 1.96
RNF208Q9H0X6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.31■■□□□ 1.96
RNF208Q9H0X6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
RNF208Q9H0X6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RNF208Q9H0X6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF208Q9H0X6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.3■■□□□ 1.96
RNF208Q9H0X6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RNF208Q9H0X6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.3■■□□□ 1.96
RNF208Q9H0X6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RNF208Q9H0X6 AL356740.2-201ENST00000601559 647 ntBASIC27.3■■□□□ 1.96
RNF208Q9H0X6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.3■■□□□ 1.96
RNF208Q9H0X6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RNF208Q9H0X6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RNF208Q9H0X6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC27.29■■□□□ 1.96
RNF208Q9H0X6 MIR4466-201ENST00000606121 54 ntBASIC27.29■■□□□ 1.96
RNF208Q9H0X6 MIR6724-1-201ENST00000616420 92 ntBASIC27.29■■□□□ 1.96
RNF208Q9H0X6 MIR6724-2-201ENST00000616483 92 ntBASIC27.29■■□□□ 1.96
RNF208Q9H0X6 MIR6724-4-201ENST00000617390 92 ntBASIC27.29■■□□□ 1.96
RNF208Q9H0X6 MIR6724-3-201ENST00000622482 92 ntBASIC27.29■■□□□ 1.96
RNF208Q9H0X6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
RNF208Q9H0X6 AL139393.2-201ENST00000608721 2025 ntBASIC27.29■■□□□ 1.96
RNF208Q9H0X6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RNF208Q9H0X6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC27.28■■□□□ 1.96
RNF208Q9H0X6 ZNRF2P3-201ENST00000424200 374 ntBASIC27.28■■□□□ 1.96
RNF208Q9H0X6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.27■■□□□ 1.96
RNF208Q9H0X6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
RNF208Q9H0X6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RNF208Q9H0X6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
RNF208Q9H0X6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RNF208Q9H0X6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.25■■□□□ 1.95
RNF208Q9H0X6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.25■■□□□ 1.95
RNF208Q9H0X6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RNF208Q9H0X6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.25■■□□□ 1.95
RNF208Q9H0X6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RNF208Q9H0X6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RNF208Q9H0X6 MTDHP2-201ENST00000601468 714 ntBASIC27.24■■□□□ 1.95
RNF208Q9H0X6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC27.23■■□□□ 1.95
RNF208Q9H0X6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.23■■□□□ 1.95
RNF208Q9H0X6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.23■■□□□ 1.95
RNF208Q9H0X6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RNF208Q9H0X6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
RNF208Q9H0X6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RNF208Q9H0X6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RNF208Q9H0X6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.22■■□□□ 1.95
RNF208Q9H0X6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RNF208Q9H0X6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.21■■□□□ 1.95
RNF208Q9H0X6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
RNF208Q9H0X6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC27.21■■□□□ 1.95
RNF208Q9H0X6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RNF208Q9H0X6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
RNF208Q9H0X6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.21■■□□□ 1.95
RNF208Q9H0X6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RNF208Q9H0X6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.94
RNF208Q9H0X6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RNF208Q9H0X6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RNF208Q9H0X6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RNF208Q9H0X6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.19■■□□□ 1.94
RNF208Q9H0X6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
RNF208Q9H0X6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RNF208Q9H0X6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.19■■□□□ 1.94
RNF208Q9H0X6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RNF208Q9H0X6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.19■■□□□ 1.94
RNF208Q9H0X6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.19■■□□□ 1.94
RNF208Q9H0X6 MIR4281-201ENST00000580852 62 ntBASIC27.19■■□□□ 1.94
RNF208Q9H0X6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RNF208Q9H0X6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.18■■□□□ 1.94
RNF208Q9H0X6 AC026271.2-201ENST00000428091 497 ntBASIC27.18■■□□□ 1.94
RNF208Q9H0X6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
RNF208Q9H0X6 AC104564.3-201ENST00000582367 638 ntBASIC27.18■■□□□ 1.94
RNF208Q9H0X6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RNF208Q9H0X6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.18■■□□□ 1.94
RNF208Q9H0X6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF208Q9H0X6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.17■■□□□ 1.94
RNF208Q9H0X6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.17■■□□□ 1.94
RNF208Q9H0X6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
RNF208Q9H0X6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RNF208Q9H0X6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.16■■□□□ 1.94
RNF208Q9H0X6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RNF208Q9H0X6 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.16■■□□□ 1.94
RNF208Q9H0X6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RNF208Q9H0X6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RNF208Q9H0X6 AC142381.2-201ENST00000566120 298 ntBASIC27.15■■□□□ 1.94
RNF208Q9H0X6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.15■■□□□ 1.94
RNF208Q9H0X6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RNF208Q9H0X6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
RNF208Q9H0X6 PBX2P1-201ENST00000493219 1291 ntBASIC27.14■■□□□ 1.94
RNF208Q9H0X6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.14■■□□□ 1.94
RNF208Q9H0X6 AL512631.2-201ENST00000604634 923 ntBASIC27.14■■□□□ 1.94
RNF208Q9H0X6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
RNF208Q9H0X6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RNF208Q9H0X6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.13■■□□□ 1.93
RNF208Q9H0X6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RNF208Q9H0X6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
RNF208Q9H0X6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.12■■□□□ 1.93
RNF208Q9H0X6 AC106739.1-201ENST00000617035 715 ntBASIC27.12■■□□□ 1.93
RNF208Q9H0X6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms