Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD3Q96EY7 AC138932.3-201ENST00000567634 1902 ntBASIC23.81■■□□□ 1.4
PTCD3Q96EY7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD3Q96EY7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD3Q96EY7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD3Q96EY7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD3Q96EY7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.8■■□□□ 1.4
PTCD3Q96EY7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.8■■□□□ 1.4
PTCD3Q96EY7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD3Q96EY7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD3Q96EY7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTCD3Q96EY7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCD3Q96EY7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PTCD3Q96EY7 AC010501.1-201ENST00000606270 1962 ntBASIC23.79■■□□□ 1.4
PTCD3Q96EY7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTCD3Q96EY7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.79■■□□□ 1.4
PTCD3Q96EY7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.78■■□□□ 1.4
PTCD3Q96EY7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
PTCD3Q96EY7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTCD3Q96EY7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD3Q96EY7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD3Q96EY7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD3Q96EY7 MIR639-201ENST00000384974 98 ntBASIC23.77■■□□□ 1.4
PTCD3Q96EY7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.77■■□□□ 1.4
PTCD3Q96EY7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD3Q96EY7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PTCD3Q96EY7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
PTCD3Q96EY7 AC022211.4-201ENST00000625094 2161 ntBASIC23.76■■□□□ 1.39
PTCD3Q96EY7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PTCD3Q96EY7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD3Q96EY7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PTCD3Q96EY7 AL359258.2-201ENST00000564063 1566 ntBASIC23.76■■□□□ 1.39
PTCD3Q96EY7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD3Q96EY7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.76■■□□□ 1.39
PTCD3Q96EY7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.76■■□□□ 1.39
PTCD3Q96EY7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD3Q96EY7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTCD3Q96EY7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
PTCD3Q96EY7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD3Q96EY7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD3Q96EY7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.75■■□□□ 1.39
PTCD3Q96EY7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD3Q96EY7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCD3Q96EY7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD3Q96EY7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD3Q96EY7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD3Q96EY7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD3Q96EY7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCD3Q96EY7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PTCD3Q96EY7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
PTCD3Q96EY7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTCD3Q96EY7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.73■■□□□ 1.39
PTCD3Q96EY7 AC126177.7-201ENST00000547904 679 ntBASIC23.73■■□□□ 1.39
PTCD3Q96EY7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.73■■□□□ 1.39
PTCD3Q96EY7 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.73■■□□□ 1.39
PTCD3Q96EY7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PTCD3Q96EY7 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.73■■□□□ 1.39
PTCD3Q96EY7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTCD3Q96EY7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTCD3Q96EY7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.73■■□□□ 1.39
PTCD3Q96EY7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
PTCD3Q96EY7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTCD3Q96EY7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.72■■□□□ 1.39
PTCD3Q96EY7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.72■■□□□ 1.39
PTCD3Q96EY7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTCD3Q96EY7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTCD3Q96EY7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTCD3Q96EY7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTCD3Q96EY7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTCD3Q96EY7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PTCD3Q96EY7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PTCD3Q96EY7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PTCD3Q96EY7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.71■■□□□ 1.39
PTCD3Q96EY7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PTCD3Q96EY7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PTCD3Q96EY7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PTCD3Q96EY7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PTCD3Q96EY7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PTCD3Q96EY7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
PTCD3Q96EY7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PTCD3Q96EY7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
PTCD3Q96EY7 AC012676.1-201ENST00000574705 1949 ntBASIC23.7■■□□□ 1.38
PTCD3Q96EY7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCD3Q96EY7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTCD3Q96EY7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 472.9 ms