Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC71LQ8N9Z2 AC087741.3-201ENST00000624270 1347 ntBASIC19.87■□□□□ 0.77
CCDC71LQ8N9Z2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC71LQ8N9Z2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC71LQ8N9Z2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC71LQ8N9Z2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC71LQ8N9Z2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC71LQ8N9Z2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC71LQ8N9Z2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC71LQ8N9Z2 AP003733.4-201ENST00000623785 1697 ntBASIC19.86■□□□□ 0.77
CCDC71LQ8N9Z2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC71LQ8N9Z2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC71LQ8N9Z2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC71LQ8N9Z2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC71LQ8N9Z2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC71LQ8N9Z2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC71LQ8N9Z2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC71LQ8N9Z2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC71LQ8N9Z2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC71LQ8N9Z2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC71LQ8N9Z2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC71LQ8N9Z2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC71LQ8N9Z2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC71LQ8N9Z2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC71LQ8N9Z2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC71LQ8N9Z2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CCDC71LQ8N9Z2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC71LQ8N9Z2 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC71LQ8N9Z2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC71LQ8N9Z2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC71LQ8N9Z2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC71LQ8N9Z2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC71LQ8N9Z2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC71LQ8N9Z2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC71LQ8N9Z2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC71LQ8N9Z2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC71LQ8N9Z2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC71LQ8N9Z2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC71LQ8N9Z2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC71LQ8N9Z2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC71LQ8N9Z2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC71LQ8N9Z2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC71LQ8N9Z2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC71LQ8N9Z2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71LQ8N9Z2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71LQ8N9Z2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71LQ8N9Z2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71LQ8N9Z2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71LQ8N9Z2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC71LQ8N9Z2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71LQ8N9Z2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71LQ8N9Z2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71LQ8N9Z2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71LQ8N9Z2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71LQ8N9Z2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71LQ8N9Z2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71LQ8N9Z2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71LQ8N9Z2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71LQ8N9Z2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC71LQ8N9Z2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC71LQ8N9Z2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71LQ8N9Z2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CCDC71LQ8N9Z2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71LQ8N9Z2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71LQ8N9Z2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC71LQ8N9Z2 LINC01124-201ENST00000409786 2117 ntBASIC19.79■□□□□ 0.76
CCDC71LQ8N9Z2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC71LQ8N9Z2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC71LQ8N9Z2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC71LQ8N9Z2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC71LQ8N9Z2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC71LQ8N9Z2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC71LQ8N9Z2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC71LQ8N9Z2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC71LQ8N9Z2 AC021231.2-201ENST00000594613 730 ntBASIC19.79■□□□□ 0.76
CCDC71LQ8N9Z2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC71LQ8N9Z2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC71LQ8N9Z2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC71LQ8N9Z2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC71LQ8N9Z2 DUX4L29-201ENST00000425409 679 ntBASIC19.78■□□□□ 0.76
CCDC71LQ8N9Z2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC71LQ8N9Z2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC71LQ8N9Z2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC71LQ8N9Z2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC71LQ8N9Z2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC71LQ8N9Z2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC71LQ8N9Z2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
CCDC71LQ8N9Z2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC71LQ8N9Z2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC71LQ8N9Z2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC71LQ8N9Z2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC71LQ8N9Z2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC71LQ8N9Z2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC71LQ8N9Z2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC71LQ8N9Z2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC71LQ8N9Z2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC71LQ8N9Z2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC71LQ8N9Z2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC71LQ8N9Z2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC71LQ8N9Z2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms