Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.76
CBWD3Q5JTY5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
CBWD3Q5JTY5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CBWD3Q5JTY5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.07■■□□□ 1.76
CBWD3Q5JTY5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
CBWD3Q5JTY5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CBWD3Q5JTY5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CBWD3Q5JTY5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CBWD3Q5JTY5 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.06■■□□□ 1.76
CBWD3Q5JTY5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CBWD3Q5JTY5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
CBWD3Q5JTY5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
CBWD3Q5JTY5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CBWD3Q5JTY5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CBWD3Q5JTY5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CBWD3Q5JTY5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.05■■□□□ 1.76
CBWD3Q5JTY5 AC026202.3-201ENST00000600805 1127 ntBASIC26.05■■□□□ 1.76
CBWD3Q5JTY5 RAP2CP1-202ENST00000605179 643 ntBASIC26.05■■□□□ 1.76
CBWD3Q5JTY5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.05■■□□□ 1.76
CBWD3Q5JTY5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.05■■□□□ 1.76
CBWD3Q5JTY5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CBWD3Q5JTY5 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.04■■□□□ 1.76
CBWD3Q5JTY5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CBWD3Q5JTY5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
CBWD3Q5JTY5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.03■■□□□ 1.76
CBWD3Q5JTY5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CBWD3Q5JTY5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CBWD3Q5JTY5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
CBWD3Q5JTY5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CBWD3Q5JTY5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CBWD3Q5JTY5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CBWD3Q5JTY5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.01■■□□□ 1.76
CBWD3Q5JTY5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CBWD3Q5JTY5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.01■■□□□ 1.75
CBWD3Q5JTY5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.01■■□□□ 1.75
CBWD3Q5JTY5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CBWD3Q5JTY5 RARRES2P2-201ENST00000394842 485 ntBASIC26■■□□□ 1.75
CBWD3Q5JTY5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
CBWD3Q5JTY5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CBWD3Q5JTY5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.99■■□□□ 1.75
CBWD3Q5JTY5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CBWD3Q5JTY5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.99■■□□□ 1.75
CBWD3Q5JTY5 AC009831.1-201ENST00000580420 1582 ntBASIC25.99■■□□□ 1.75
CBWD3Q5JTY5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CBWD3Q5JTY5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CBWD3Q5JTY5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CBWD3Q5JTY5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CBWD3Q5JTY5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.97■■□□□ 1.75
CBWD3Q5JTY5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.97■■□□□ 1.75
CBWD3Q5JTY5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
CBWD3Q5JTY5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CBWD3Q5JTY5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CBWD3Q5JTY5 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.96■■□□□ 1.75
CBWD3Q5JTY5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.96■■□□□ 1.75
CBWD3Q5JTY5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
CBWD3Q5JTY5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
CBWD3Q5JTY5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
CBWD3Q5JTY5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CBWD3Q5JTY5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.95■■□□□ 1.74
CBWD3Q5JTY5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CBWD3Q5JTY5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CBWD3Q5JTY5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.94■■□□□ 1.74
CBWD3Q5JTY5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.94■■□□□ 1.74
CBWD3Q5JTY5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.94■■□□□ 1.74
CBWD3Q5JTY5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.94■■□□□ 1.74
CBWD3Q5JTY5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
CBWD3Q5JTY5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CBWD3Q5JTY5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CBWD3Q5JTY5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CBWD3Q5JTY5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CBWD3Q5JTY5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.93■■□□□ 1.74
CBWD3Q5JTY5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CBWD3Q5JTY5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CBWD3Q5JTY5 AC133552.2-201ENST00000619106 1032 ntBASIC25.93■■□□□ 1.74
CBWD3Q5JTY5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CBWD3Q5JTY5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
CBWD3Q5JTY5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.93■■□□□ 1.74
CBWD3Q5JTY5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
CBWD3Q5JTY5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
CBWD3Q5JTY5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CBWD3Q5JTY5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CBWD3Q5JTY5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CBWD3Q5JTY5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CBWD3Q5JTY5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CBWD3Q5JTY5 AC097639.1-201ENST00000565519 1891 ntBASIC25.91■■□□□ 1.74
CBWD3Q5JTY5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.91■■□□□ 1.74
CBWD3Q5JTY5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CBWD3Q5JTY5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
CBWD3Q5JTY5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.91■■□□□ 1.74
CBWD3Q5JTY5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CBWD3Q5JTY5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.91■■□□□ 1.74
CBWD3Q5JTY5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CBWD3Q5JTY5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CBWD3Q5JTY5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
CBWD3Q5JTY5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CBWD3Q5JTY5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CBWD3Q5JTY5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CBWD3Q5JTY5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CBWD3Q5JTY5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CBWD3Q5JTY5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms