Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 ATG22YCL038C 1587 nt5.81□□□□□ -1.48
RRP40Q08285 RSA4YCR072C 1548 nt5.81□□□□□ -1.48
RRP40Q08285 YHR070C-AYHR070C-A 411 nt5.81□□□□□ -1.48
RRP40Q08285 BSC4YNL269W 396 nt5.81□□□□□ -1.48
RRP40Q08285 RPS28AYOR167C 204 nt5.81□□□□□ -1.48
RRP40Q08285 YEL020CYEL020C 1683 nt5.81□□□□□ -1.48
RRP40Q08285 HXT17YNR072W 1695 nt5.81□□□□□ -1.48
RRP40Q08285 YTP1YNL237W 1380 nt5.8□□□□□ -1.48
RRP40Q08285 VHT1YGR065C 1782 nt5.8□□□□□ -1.48
RRP40Q08285 ICL1YER065C 1674 nt5.8□□□□□ -1.48
RRP40Q08285 VPS61YDR136C 573 nt5.8□□□□□ -1.48
RRP40Q08285 MOG1YJR074W 657 nt5.8□□□□□ -1.48
RRP40Q08285 ZRT2YLR130C 1269 nt5.8□□□□□ -1.48
RRP40Q08285 CAF40YNL288W 1122 nt5.8□□□□□ -1.48
RRP40Q08285 SGV1YPR161C 1974 nt5.8□□□□□ -1.48
RRP40Q08285 KTR5YNL029C 1569 nt5.8□□□□□ -1.48
RRP40Q08285 RMD9YGL107C 1941 nt5.8□□□□□ -1.48
RRP40Q08285 DOT5YIL010W 648 nt5.79□□□□□ -1.48
RRP40Q08285 DUS4YLR405W 1104 nt5.79□□□□□ -1.48
RRP40Q08285 NME1NME1 340 nt5.79□□□□□ -1.48
RRP40Q08285 NHA1YLR138W 2958 nt5.79□□□□□ -1.48
RRP40Q08285 KEL1YHR158C 3495 nt5.78□□□□□ -1.48
RRP40Q08285 CDC34YDR054C 888 nt5.78□□□□□ -1.48
RRP40Q08285 COA1YIL157C 594 nt5.78□□□□□ -1.48
RRP40Q08285 LDS1YAL018C 978 nt5.78□□□□□ -1.48
RRP40Q08285 YML6YML025C 861 nt5.78□□□□□ -1.48
RRP40Q08285 RRS1YOR294W 612 nt5.78□□□□□ -1.48
RRP40Q08285 YOR300WYOR300W 309 nt5.78□□□□□ -1.48
RRP40Q08285 IVY1YDR229W 1362 nt5.78□□□□□ -1.48
RRP40Q08285 LYS21YDL131W 1323 nt5.77□□□□□ -1.49
RRP40Q08285 YDR278CYDR278C 318 nt5.77□□□□□ -1.49
RRP40Q08285 YIR042CYIR042C 711 nt5.77□□□□□ -1.49
RRP40Q08285 JNM1YMR294W 1122 nt5.77□□□□□ -1.49
RRP40Q08285 WHI2YOR043W 1461 nt5.77□□□□□ -1.49
RRP40Q08285 YHC3YJL059W 1227 nt5.76□□□□□ -1.49
RRP40Q08285 RPS5YJR123W 678 nt5.76□□□□□ -1.49
RRP40Q08285 MOD5YOR274W 1287 nt5.76□□□□□ -1.49
RRP40Q08285 HDA1YNL021W 2121 nt5.75□□□□□ -1.49
RRP40Q08285 ESC8YOL017W 2145 nt5.75□□□□□ -1.49
RRP40Q08285 YDR034W-BYDR034W-B 156 nt5.75□□□□□ -1.49
RRP40Q08285 YEL068CYEL068C 333 nt5.75□□□□□ -1.49
RRP40Q08285 YGL235WYGL235W 537 nt5.75□□□□□ -1.49
RRP40Q08285 BUD32YGR262C 786 nt5.75□□□□□ -1.49
RRP40Q08285 TSA1YML028W 591 nt5.75□□□□□ -1.49
RRP40Q08285 DAP1YPL170W 459 nt5.75□□□□□ -1.49
RRP40Q08285 MDM31YHR194W 1740 nt5.74□□□□□ -1.49
RRP40Q08285 MED6YHR058C 888 nt5.74□□□□□ -1.49
RRP40Q08285 OAC1YKL120W 975 nt5.74□□□□□ -1.49
RRP40Q08285 YMR119W-AYMR119W-A 375 nt5.74□□□□□ -1.49
RRP40Q08285 MRPS16YPL013C 366 nt5.74□□□□□ -1.49
RRP40Q08285 LDB19YOR322C 2457 nt5.73□□□□□ -1.49
RRP40Q08285 PDR18YNR070W 4002 nt5.73□□□□□ -1.49
RRP40Q08285 GUD1YDL238C 1470 nt5.73□□□□□ -1.49
RRP40Q08285 COX9YDL067C 180 nt5.73□□□□□ -1.49
RRP40Q08285 GCV3YAL044C 513 nt5.73□□□□□ -1.49
RRP40Q08285 SAC6YDR129C 1929 nt5.72□□□□□ -1.49
RRP40Q08285 YDL129WYDL129W 876 nt5.72□□□□□ -1.49
RRP40Q08285 AVO2YMR068W 1281 nt5.72□□□□□ -1.49
RRP40Q08285 UTP4YDR324C 2331 nt5.72□□□□□ -1.49
RRP40Q08285 SKS1YPL026C 1509 nt5.72□□□□□ -1.49
RRP40Q08285 SUB2YDL084W 1341 nt5.72□□□□□ -1.49
RRP40Q08285 MRPL1YDR116C 858 nt5.71□□□□□ -1.5
RRP40Q08285 BCY1YIL033C 1251 nt5.71□□□□□ -1.5
RRP40Q08285 YNL042W-BYNL042W-B 258 nt5.71□□□□□ -1.5
RRP40Q08285 YPR114WYPR114W 948 nt5.71□□□□□ -1.5
RRP40Q08285 YPR160C-AYPR160C-A 285 nt5.71□□□□□ -1.5
RRP40Q08285 YDR514CYDR514C 1452 nt5.71□□□□□ -1.5
RRP40Q08285 GPI11YDR302W 660 nt5.7□□□□□ -1.5
RRP40Q08285 FZF1YGL254W 900 nt5.7□□□□□ -1.5
RRP40Q08285 tR(ACG)DtR(ACG)D 73 nt5.7□□□□□ -1.5
RRP40Q08285 tR(ACG)EtR(ACG)E 73 nt5.7□□□□□ -1.5
RRP40Q08285 tR(ACG)KtR(ACG)K 73 nt5.7□□□□□ -1.5
RRP40Q08285 tR(ACG)LtR(ACG)L 73 nt5.7□□□□□ -1.5
RRP40Q08285 tR(ACG)OtR(ACG)O 73 nt5.7□□□□□ -1.5
RRP40Q08285 HST3YOR025W 1344 nt5.7□□□□□ -1.5
RRP40Q08285 PCS60YBR222C 1632 nt5.7□□□□□ -1.5
RRP40Q08285 STB5YHR178W 2232 nt5.69□□□□□ -1.5
RRP40Q08285 YHM2YMR241W 945 nt5.69□□□□□ -1.5
RRP40Q08285 AFG1YEL052W 1530 nt5.69□□□□□ -1.5
RRP40Q08285 HAS1YMR290C 1518 nt5.69□□□□□ -1.5
RRP40Q08285 DUG1YFR044C 1446 nt5.68□□□□□ -1.5
RRP40Q08285 KKQ8YKL168C 2175 nt5.68□□□□□ -1.5
RRP40Q08285 SKN1YGR143W 2316 nt5.68□□□□□ -1.5
RRP40Q08285 YFR006WYFR006W 1608 nt5.67□□□□□ -1.5
RRP40Q08285 RPT3YDR394W 1287 nt5.67□□□□□ -1.5
RRP40Q08285 LEU5YHR002W 1074 nt5.67□□□□□ -1.5
RRP40Q08285 QNS1YHR074W 2145 nt5.67□□□□□ -1.5
RRP40Q08285 UIP4YPL186C 915 nt5.67□□□□□ -1.5
RRP40Q08285 RAD24YER173W 1980 nt5.67□□□□□ -1.5
RRP40Q08285 ADE12YNL220W 1302 nt5.67□□□□□ -1.5
RRP40Q08285 PFK2YMR205C 2880 nt5.66□□□□□ -1.5
RRP40Q08285 MTC5YDR128W 3447 nt5.66□□□□□ -1.5
RRP40Q08285 ECM19YLR390W 339 nt5.66□□□□□ -1.5
RRP40Q08285 HAP3YBL021C 435 nt5.66□□□□□ -1.5
RRP40Q08285 CWC27YPL064C 906 nt5.66□□□□□ -1.5
RRP40Q08285 YBR124WYBR124W 360 nt5.66□□□□□ -1.5
RRP40Q08285 TEP1YNL128W 1305 nt5.66□□□□□ -1.5
RRP40Q08285 PET112YBL080C 1626 nt5.66□□□□□ -1.5
RRP40Q08285 SIT4YDL047W 936 nt5.65□□□□□ -1.5
RRP40Q08285 MRPS12YNR036C 462 nt5.65□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 82.7 ms