Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIST1H3AP68431 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HIST1H3AP68431 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.03■□□□□ 0.96
HIST1H3AP68431 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
HIST1H3AP68431 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H3AP68431 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
HIST1H3AP68431 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
HIST1H3AP68431 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H3AP68431 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HIST1H3AP68431 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H3AP68431 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST1H3AP68431 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HIST1H3AP68431 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIST1H3AP68431 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
HIST1H3AP68431 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIST1H3AP68431 AC093536.1-201ENST00000569153 554 ntBASIC21.02■□□□□ 0.96
HIST1H3AP68431 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.02■□□□□ 0.96
HIST1H3AP68431 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HIST1H3AP68431 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.01■□□□□ 0.95
HIST1H3AP68431 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.01■□□□□ 0.95
HIST1H3AP68431 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.01■□□□□ 0.95
HIST1H3AP68431 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.01■□□□□ 0.95
HIST1H3AP68431 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HIST1H3AP68431 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21■□□□□ 0.95
HIST1H3AP68431 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21■□□□□ 0.95
HIST1H3AP68431 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HIST1H3AP68431 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HIST1H3AP68431 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HIST1H3AP68431 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HIST1H3AP68431 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HIST1H3AP68431 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.99■□□□□ 0.95
HIST1H3AP68431 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.99■□□□□ 0.95
HIST1H3AP68431 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST1H3AP68431 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HIST1H3AP68431 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST1H3AP68431 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST1H3AP68431 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST1H3AP68431 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.98■□□□□ 0.95
HIST1H3AP68431 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.98■□□□□ 0.95
HIST1H3AP68431 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.98■□□□□ 0.95
HIST1H3AP68431 RAP2CP1-202ENST00000605179 643 ntBASIC20.98■□□□□ 0.95
HIST1H3AP68431 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST1H3AP68431 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HIST1H3AP68431 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H3AP68431 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.97■□□□□ 0.95
HIST1H3AP68431 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.97■□□□□ 0.95
HIST1H3AP68431 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIST1H3AP68431 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H3AP68431 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
HIST1H3AP68431 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H3AP68431 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H3AP68431 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H3AP68431 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
HIST1H3AP68431 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HIST1H3AP68431 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIST1H3AP68431 RNF126P1-201ENST00000567452 1320 ntBASIC20.96■□□□□ 0.95
HIST1H3AP68431 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.96■□□□□ 0.95
HIST1H3AP68431 AC097639.1-201ENST00000565519 1891 ntBASIC20.96■□□□□ 0.95
HIST1H3AP68431 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIST1H3AP68431 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIST1H3AP68431 AC026202.3-201ENST00000600805 1127 ntBASIC20.95■□□□□ 0.94
HIST1H3AP68431 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HIST1H3AP68431 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIST1H3AP68431 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HIST1H3AP68431 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.94■□□□□ 0.94
HIST1H3AP68431 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIST1H3AP68431 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HIST1H3AP68431 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIST1H3AP68431 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HIST1H3AP68431 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HIST1H3AP68431 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.93■□□□□ 0.94
HIST1H3AP68431 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
HIST1H3AP68431 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIST1H3AP68431 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HIST1H3AP68431 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HIST1H3AP68431 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIST1H3AP68431 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIST1H3AP68431 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HIST1H3AP68431 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.92■□□□□ 0.94
HIST1H3AP68431 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST1H3AP68431 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HIST1H3AP68431 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.92■□□□□ 0.94
HIST1H3AP68431 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HIST1H3AP68431 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HIST1H3AP68431 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.92■□□□□ 0.94
HIST1H3AP68431 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HIST1H3AP68431 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIST1H3AP68431 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIST1H3AP68431 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HIST1H3AP68431 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
HIST1H3AP68431 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.91■□□□□ 0.94
HIST1H3AP68431 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
HIST1H3AP68431 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HIST1H3AP68431 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H3AP68431 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H3AP68431 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H3AP68431 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H3AP68431 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIST1H3AP68431 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.9■□□□□ 0.94
HIST1H3AP68431 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms