Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRP9P49458 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRP9P49458 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SRP9P49458 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
SRP9P49458 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
SRP9P49458 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.14■□□□□ 0.97
SRP9P49458 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRP9P49458 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SRP9P49458 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRP9P49458 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SRP9P49458 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRP9P49458 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRP9P49458 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRP9P49458 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRP9P49458 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRP9P49458 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRP9P49458 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRP9P49458 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.13■□□□□ 0.97
SRP9P49458 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.13■□□□□ 0.97
SRP9P49458 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRP9P49458 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.13■□□□□ 0.97
SRP9P49458 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRP9P49458 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SRP9P49458 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRP9P49458 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRP9P49458 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.12■□□□□ 0.97
SRP9P49458 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SRP9P49458 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.12■□□□□ 0.97
SRP9P49458 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SRP9P49458 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SRP9P49458 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.12■□□□□ 0.97
SRP9P49458 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRP9P49458 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.11■□□□□ 0.97
SRP9P49458 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SRP9P49458 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRP9P49458 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRP9P49458 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.1■□□□□ 0.97
SRP9P49458 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRP9P49458 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRP9P49458 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRP9P49458 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.09■□□□□ 0.97
SRP9P49458 WHAMMP3-201ENST00000611636 1609 ntBASIC21.09■□□□□ 0.97
SRP9P49458 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SRP9P49458 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SRP9P49458 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRP9P49458 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRP9P49458 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRP9P49458 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.08■□□□□ 0.97
SRP9P49458 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SRP9P49458 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SRP9P49458 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
SRP9P49458 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRP9P49458 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRP9P49458 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SRP9P49458 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRP9P49458 AL359258.2-201ENST00000564063 1566 ntBASIC21.07■□□□□ 0.96
SRP9P49458 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.07■□□□□ 0.96
SRP9P49458 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.07■□□□□ 0.96
SRP9P49458 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.07■□□□□ 0.96
SRP9P49458 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SRP9P49458 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.07■□□□□ 0.96
SRP9P49458 AC142381.3-201ENST00000568208 1670 ntBASIC21.07■□□□□ 0.96
SRP9P49458 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRP9P49458 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRP9P49458 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SRP9P49458 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.06■□□□□ 0.96
SRP9P49458 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRP9P49458 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SRP9P49458 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SRP9P49458 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.06■□□□□ 0.96
SRP9P49458 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRP9P49458 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRP9P49458 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SRP9P49458 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP9P49458 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRP9P49458 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SRP9P49458 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP9P49458 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP9P49458 AC022413.1-201ENST00000624602 984 ntBASIC21.05■□□□□ 0.96
SRP9P49458 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SRP9P49458 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP9P49458 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP9P49458 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRP9P49458 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP9P49458 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP9P49458 AL139125.2-201ENST00000623134 1869 ntBASIC21.05■□□□□ 0.96
SRP9P49458 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP9P49458 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SRP9P49458 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRP9P49458 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRP9P49458 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRP9P49458 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRP9P49458 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRP9P49458 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRP9P49458 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.04■□□□□ 0.96
SRP9P49458 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SRP9P49458 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRP9P49458 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.03■□□□□ 0.96
SRP9P49458 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SRP9P49458 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms