Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PDGFBP01127 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PDGFBP01127 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PDGFBP01127 AC010997.5-201ENST00000609182 354 ntBASIC24.71■■□□□ 1.55
PDGFBP01127 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PDGFBP01127 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PDGFBP01127 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
PDGFBP01127 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.7■■□□□ 1.54
PDGFBP01127 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.7■■□□□ 1.54
PDGFBP01127 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
PDGFBP01127 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PDGFBP01127 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PDGFBP01127 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
PDGFBP01127 AC104564.3-201ENST00000582367 638 ntBASIC24.69■■□□□ 1.54
PDGFBP01127 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.69■■□□□ 1.54
PDGFBP01127 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
PDGFBP01127 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDGFBP01127 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDGFBP01127 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.68■■□□□ 1.54
PDGFBP01127 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.68■■□□□ 1.54
PDGFBP01127 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.68■■□□□ 1.54
PDGFBP01127 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PDGFBP01127 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PDGFBP01127 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.68■■□□□ 1.54
PDGFBP01127 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.67■■□□□ 1.54
PDGFBP01127 MIR6724-1-201ENST00000616420 92 ntBASIC24.67■■□□□ 1.54
PDGFBP01127 MIR6724-2-201ENST00000616483 92 ntBASIC24.67■■□□□ 1.54
PDGFBP01127 MIR6724-4-201ENST00000617390 92 ntBASIC24.67■■□□□ 1.54
PDGFBP01127 MIR6724-3-201ENST00000622482 92 ntBASIC24.67■■□□□ 1.54
PDGFBP01127 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.67■■□□□ 1.54
PDGFBP01127 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDGFBP01127 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.66■■□□□ 1.54
PDGFBP01127 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.66■■□□□ 1.54
PDGFBP01127 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.66■■□□□ 1.54
PDGFBP01127 AL356740.2-201ENST00000601559 647 ntBASIC24.66■■□□□ 1.54
PDGFBP01127 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
PDGFBP01127 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
PDGFBP01127 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDGFBP01127 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.65■■□□□ 1.54
PDGFBP01127 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.64■■□□□ 1.54
PDGFBP01127 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDGFBP01127 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDGFBP01127 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDGFBP01127 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDGFBP01127 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.63■■□□□ 1.53
PDGFBP01127 AL512631.2-201ENST00000604634 923 ntBASIC24.63■■□□□ 1.53
PDGFBP01127 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDGFBP01127 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.63■■□□□ 1.53
PDGFBP01127 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDGFBP01127 AC135279.3-201ENST00000610945 1311 ntBASIC24.62■■□□□ 1.53
PDGFBP01127 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.62■■□□□ 1.53
PDGFBP01127 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.62■■□□□ 1.53
PDGFBP01127 MTDHP2-201ENST00000601468 714 ntBASIC24.62■■□□□ 1.53
PDGFBP01127 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDGFBP01127 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDGFBP01127 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
PDGFBP01127 AC142381.2-201ENST00000566120 298 ntBASIC24.61■■□□□ 1.53
PDGFBP01127 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
PDGFBP01127 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDGFBP01127 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDGFBP01127 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDGFBP01127 MIR4281-201ENST00000580852 62 ntBASIC24.6■■□□□ 1.53
PDGFBP01127 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.6■■□□□ 1.53
PDGFBP01127 AL139393.2-201ENST00000608721 2025 ntBASIC24.6■■□□□ 1.53
PDGFBP01127 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PDGFBP01127 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDGFBP01127 PBX2P1-201ENST00000493219 1291 ntBASIC24.59■■□□□ 1.53
PDGFBP01127 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.59■■□□□ 1.53
PDGFBP01127 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.59■■□□□ 1.53
PDGFBP01127 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.59■■□□□ 1.53
PDGFBP01127 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PDGFBP01127 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.58■■□□□ 1.53
PDGFBP01127 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.58■■□□□ 1.53
PDGFBP01127 MIR5787-201ENST00000611784 55 ntBASIC24.58■■□□□ 1.53
PDGFBP01127 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.58■■□□□ 1.53
PDGFBP01127 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
PDGFBP01127 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PDGFBP01127 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PDGFBP01127 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
PDGFBP01127 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDGFBP01127 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDGFBP01127 AC106739.1-201ENST00000617035 715 ntBASIC24.57■■□□□ 1.52
PDGFBP01127 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.57■■□□□ 1.52
PDGFBP01127 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.57■■□□□ 1.52
PDGFBP01127 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDGFBP01127 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.57■■□□□ 1.52
PDGFBP01127 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDGFBP01127 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PDGFBP01127 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
PDGFBP01127 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PDGFBP01127 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.56■■□□□ 1.52
PDGFBP01127 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PDGFBP01127 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.56■■□□□ 1.52
PDGFBP01127 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PDGFBP01127 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
PDGFBP01127 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.55■■□□□ 1.52
PDGFBP01127 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.55■■□□□ 1.52
PDGFBP01127 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.55■■□□□ 1.52
PDGFBP01127 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PDGFBP01127 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms